Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 TIMM8BP2-201ENST00000445940 251 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AL354710.1-201ENST00000453641 246 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 HMGB1P4-201ENST00000455362 567 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.33□□□□□ -1.56
CASQ1P31415 RPS17P2-201ENST00000461663 408 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC011476.1-201ENST00000466725 307 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 RN7SL51P-201ENST00000468230 285 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 CYCSP22-201ENST00000517555 339 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC060775.1-201ENST00000518241 520 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.33□□□□□ -1.56
CASQ1P31415 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.33□□□□□ -1.56
CASQ1P31415 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.33□□□□□ -1.56
CASQ1P31415 BTG1P1-201ENST00000540396 508 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CASQ1P31415 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.33□□□□□ -1.56
CASQ1P31415 AC087477.6-201ENST00000559595 843 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC234782.5-201ENST00000617723 324 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC021106.3-201ENST00000623925 531 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 AC074101.1-201ENST00000637861 241 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CASQ1P31415 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.33□□□□□ -1.56
CASQ1P31415 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.33□□□□□ -1.56
CASQ1P31415 AC068254.2-201ENST00000623938 3577 ntBASIC5.33□□□□□ -1.56
CASQ1P31415 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASQ1P31415 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 AC235565.1-201ENST00000456962 1325 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.32□□□□□ -1.56
CASQ1P31415 OR52B3P-201ENST00000314715 928 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 MIR708-201ENST00000390708 88 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 RNA5SP105-201ENST00000391123 113 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CASQ1P31415 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CASQ1P31415 MIR1275-201ENST00000408770 80 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 AL596448.1-201ENST00000415024 392 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.32□□□□□ -1.56
CASQ1P31415 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CASQ1P31415 RPS27P18-201ENST00000431701 247 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.32□□□□□ -1.56
CASQ1P31415 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.32□□□□□ -1.56
CASQ1P31415 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.32□□□□□ -1.56
CASQ1P31415 AC044810.1-201ENST00000480271 711 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 HMGB3P13-201ENST00000511263 607 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.32□□□□□ -1.56
CASQ1P31415 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.32□□□□□ -1.56
CASQ1P31415 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.32□□□□□ -1.56
CASQ1P31415 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.32□□□□□ -1.56
CASQ1P31415 RPL10P14-201ENST00000565265 298 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 AC018552.3-201ENST00000567416 561 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 RPL26P30-202ENST00000602923 645 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
CASQ1P31415 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 AL133243.3-201ENST00000617415 3004 ntBASIC5.32□□□□□ -1.56
CASQ1P31415 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASQ1P31415 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CASQ1P31415 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CASQ1P31415 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CASQ1P31415 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CASQ1P31415 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.31□□□□□ -1.56
CASQ1P31415 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CASQ1P31415 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CASQ1P31415 RNA5SP46-201ENST00000362370 120 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CASQ1P31415 LAP3P1-201ENST00000403648 294 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 RPL6P29-201ENST00000414863 865 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 RPL34P3-201ENST00000421454 338 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 AC066692.1-201ENST00000421721 457 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.31□□□□□ -1.56
CASQ1P31415 RPS12P5-201ENST00000423449 371 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 MTND4LP13-201ENST00000425022 298 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 RPS4XP16-201ENST00000427198 791 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 EEF1B2P3-201ENST00000447718 678 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 AL445665.1-202ENST00000452436 324 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.31□□□□□ -1.56
CASQ1P31415 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.31□□□□□ -1.56
CASQ1P31415 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 MRPS5P3-201ENST00000515577 166 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.31□□□□□ -1.56
CASQ1P31415 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 GSTP1P1-201ENST00000548078 319 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 AC079600.1-201ENST00000550326 297 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.31□□□□□ -1.56
CASQ1P31415 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.31□□□□□ -1.56
CASQ1P31415 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CASQ1P31415 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.31□□□□□ -1.56
CASQ1P31415 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.31□□□□□ -1.56
CASQ1P31415 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.31□□□□□ -1.56
CASQ1P31415 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 FO681491.1-202ENST00000623392 737 ntBASIC5.31□□□□□ -1.56
CASQ1P31415 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.31□□□□□ -1.56
CASQ1P31415 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CASQ1P31415 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms