Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CCRL1P1-201ENST00000449542 1053 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 MORF4L1P4-201ENST00000450245 976 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 RN7SL443P-201ENST00000464331 290 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 RN7SL197P-201ENST00000466981 299 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 RN7SL319P-201ENST00000480656 221 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC018552.1-201ENST00000562099 811 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC019322.1-201ENST00000571869 389 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC091042.1-201ENST00000579213 173 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 MIR3667-201ENST00000581025 74 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 FAM106CP-201ENST00000582212 507 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AL022394.1-201ENST00000606979 292 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 AL133445.2-201ENST00000611191 527 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC004241.3-201ENST00000611728 517 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC010435.1-201ENST00000623353 1177 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AL118508.4-201ENST00000624142 1176 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXC8P31273 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HOXC8P31273 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HOXC8P31273 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 AC020656.2-201ENST00000613291 5309 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXC8P31273 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
HOXC8P31273 SNORA2.3-201ENST00000383920 135 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AF186996.5-201ENST00000418098 904 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC8P31273 MTCYBP7-201ENST00000419540 1134 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC8P31273 AC004074.1-201ENST00000421810 1063 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 RNF19BPX-201ENST00000426224 625 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC8P31273 AC138761.5-201ENST00000433967 325 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC8P31273 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC8P31273 AC073264.2-201ENST00000448886 166 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 BX842559.2-201ENST00000451418 605 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC006463.2-201ENST00000473326 348 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC008897.1-201ENST00000494006 347 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXC8P31273 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXC8P31273 AC109635.6-201ENST00000525487 1113 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 AC011453.2-201ENST00000603737 729 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC008745.1-201ENST00000604064 271 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 BNIP3P35-201ENST00000604530 490 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC005377.1-201ENST00000605126 456 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC007620.3-201ENST00000608131 497 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AL162574.2-201ENST00000614618 657 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AL109620.1-201ENST00000618738 1197 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 AC119674.1-220ENST00000641502 1048 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HOXC8P31273 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 MTCO1P15-201ENST00000529569 1526 ntBASIC5.57□□□□□ -1.52
HOXC8P31273 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXC8P31273 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC8P31273 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC8P31273 AL591135.1-201ENST00000401578 5914 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC8P31273 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HOXC8P31273 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC8P31273 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 RN7SKP145-201ENST00000363291 303 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AC104297.1-201ENST00000393779 870 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms