Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.05□□□□□ -1.44
POLR2AP24928 PRDX3P4-201ENST00000470828 747 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
POLR2AP24928 AC105313.1-201ENST00000509121 353 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AC111000.6-201ENST00000514471 709 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.05□□□□□ -1.44
POLR2AP24928 AC103792.1-201ENST00000603591 919 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AC009027.1-201ENST00000604510 479 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.05□□□□□ -1.44
POLR2AP24928 AL137100.1-201ENST00000556703 1620 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.05□□□□□ -1.44
POLR2AP24928 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.05□□□□□ -1.44
POLR2AP24928 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 DDX43P2-201ENST00000604753 1354 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AC120338.1-201ENST00000625074 1541 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 ZNF652P1-201ENST00000442420 1309 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 SNORA70F-201ENST00000384142 135 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 ELOCP19-201ENST00000411919 318 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.04□□□□□ -1.44
POLR2AP24928 AC234779.1-201ENST00000425910 285 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 MTND1P20-201ENST00000430341 950 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC092685.1-201ENST00000447960 1243 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 OR52A4P-201ENST00000472867 958 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 RPL7P41-201ENST00000485823 957 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 RNU4-18P-201ENST00000516751 149 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC130364.2-201ENST00000528639 604 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC007834.2-201ENST00000536310 343 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 PARP1P2-201ENST00000556806 195 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 BGLT3-201ENST00000564523 994 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.04□□□□□ -1.44
POLR2AP24928 MIR4675-201ENST00000577898 77 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC010857.1-201ENST00000606398 594 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC080013.3-201ENST00000606839 578 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC099654.6-201ENST00000636487 512 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 AC021755.1-201ENST00000559747 1447 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC010928.1-201ENST00000592477 1447 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
POLR2AP24928 MAPK10-270ENST00000641102 3538 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC083899.1-201ENST00000454465 3819 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
POLR2AP24928 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.04□□□□□ -1.44
POLR2AP24928 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 SNORA66-201ENST00000384792 133 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
POLR2AP24928 RPS3AP23-201ENST00000401762 784 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 UBE2D3P3-201ENST00000426992 425 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AL359265.2-201ENST00000434367 631 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 MRPS33P4-201ENST00000434892 317 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 KRT8P51-201ENST00000438938 274 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 TCEA1P1-201ENST00000449716 880 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 AL356390.1-201ENST00000455684 397 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 AC078857.1-201ENST00000469870 667 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 RPL12P20-201ENST00000475538 479 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 NPM1P17-201ENST00000479221 602 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 MTCO2P9-201ENST00000503214 694 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC108157.1-201ENST00000510511 539 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 C1DP5-201ENST00000525775 383 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.04□□□□□ -1.44
POLR2AP24928 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
POLR2AP24928 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.04□□□□□ -1.44
POLR2AP24928 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.04□□□□□ -1.44
POLR2AP24928 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
POLR2AP24928 NIFKP6-201ENST00000598115 845 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC019193.2-201ENST00000610012 634 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AL121873.1-201ENST00000616013 524 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 AC091932.2-201ENST00000623014 291 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.04□□□□□ -1.44
POLR2AP24928 AC016717.3-201ENST00000624730 554 ntBASIC6.04□□□□□ -1.44
POLR2AP24928 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.04□□□□□ -1.44
POLR2AP24928 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.04□□□□□ -1.44
POLR2AP24928 MTCO1P22-201ENST00000604619 1360 ntBASIC6.03□□□□□ -1.44
POLR2AP24928 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
POLR2AP24928 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
POLR2AP24928 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms