Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-178P-201ENST00000384631 104 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC093719.1-202ENST00000392735 373 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC009238.2-201ENST00000431026 355 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AL627224.1-201ENST00000448334 444 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RPL7AP52-201ENST00000458096 790 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RN7SL30P-201ENST00000488416 306 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC097173.1-201ENST00000505862 819 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC125612.1-201ENST00000547580 377 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 MIR1269B-201ENST00000580405 75 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC011493.1-201ENST00000596753 1632 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 OR9K1P-201ENST00000326513 941 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 U3.2-201ENST00000362981 210 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 MIR1182-201ENST00000408363 97 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 RPL26P37-201ENST00000411983 438 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 BX510359.3-201ENST00000422168 306 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 MTCO1P57-201ENST00000432182 261 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AL163193.1-201ENST00000444895 788 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC108161.1-201ENST00000461060 402 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 CDH12P2-201ENST00000504393 298 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 RNA5SP34-201ENST00000516887 130 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC134349.2-201ENST00000535136 910 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC127381.1-201ENST00000555979 939 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC095055.1-201ENST00000603472 1113 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 AL022322.2-201ENST00000624072 20397 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DPA1P20036 PABPC1P6-201ENST00000445594 1829 ntBASIC5.23□□□□□ -1.57
HLA-DPA1P20036 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 SMG1P4-204ENST00000523028 4131 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AL450326.2-201ENST00000421913 1962 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 BTBD10P1-201ENST00000549824 1352 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AC092376.2-201ENST00000622621 4116 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 SNORA17.1-201ENST00000362945 126 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 RNU6-532P-201ENST00000384318 107 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 RNU6-171P-201ENST00000384354 107 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 RNA5SP187-201ENST00000384400 119 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 MIR600-201ENST00000385007 98 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DPA1P20036 RPL21P67-201ENST00000402896 478 ntBASIC5.22□□□□□ -1.57
HLA-DPA1P20036 AL390316.1-201ENST00000406279 553 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms