Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.22□□□□□ -1.09
TOP2AP11388 AL731566.1-201ENST00000620490 1937 ntBASIC8.22□□□□□ -1.09
TOP2AP11388 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
TOP2AP11388 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC8.22□□□□□ -1.09
TOP2AP11388 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TOP2AP11388 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.21□□□□□ -1.09
TOP2AP11388 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TOP2AP11388 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
TOP2AP11388 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TOP2AP11388 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
TOP2AP11388 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TOP2AP11388 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
TOP2AP11388 MIR134-201ENST00000385258 73 ntBASIC8.21□□□□□ -1.1
TOP2AP11388 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.21□□□□□ -1.1
TOP2AP11388 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.21□□□□□ -1.1
TOP2AP11388 AC091153.1-201ENST00000466297 402 ntBASIC8.21□□□□□ -1.1
TOP2AP11388 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.21□□□□□ -1.1
TOP2AP11388 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TOP2AP11388 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.21□□□□□ -1.1
TOP2AP11388 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.21□□□□□ -1.1
TOP2AP11388 RNF138P2-201ENST00000603490 592 ntBASIC8.21□□□□□ -1.1
TOP2AP11388 AL591034.3-201ENST00000605511 685 ntBASIC8.21□□□□□ -1.1
TOP2AP11388 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.21□□□□□ -1.1
TOP2AP11388 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TOP2AP11388 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
TOP2AP11388 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOP2AP11388 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOP2AP11388 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOP2AP11388 RNU1-130P-201ENST00000363930 160 ntBASIC8.2□□□□□ -1.1
TOP2AP11388 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.2□□□□□ -1.1
TOP2AP11388 RN7SL98P-201ENST00000462271 300 ntBASIC8.2□□□□□ -1.1
TOP2AP11388 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TOP2AP11388 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOP2AP11388 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
TOP2AP11388 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TOP2AP11388 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TOP2AP11388 MED23-203ENST00000368058 4576 ntTSL 5 BASIC8.2□□□□□ -1.1
TOP2AP11388 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOP2AP11388 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
TOP2AP11388 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TOP2AP11388 AC090142.1-201ENST00000465776 462 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC8.19□□□□□ -1.1
TOP2AP11388 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.19□□□□□ -1.1
TOP2AP11388 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.19□□□□□ -1.1
TOP2AP11388 OR51H2P-202ENST00000641424 3046 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
TOP2AP11388 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOP2AP11388 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOP2AP11388 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
TOP2AP11388 ICE2P1-201ENST00000512800 1849 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
TOP2AP11388 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
TOP2AP11388 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
TOP2AP11388 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC8.19□□□□□ -1.1
TOP2AP11388 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC8.19□□□□□ -1.1
TOP2AP11388 SCP2-206ENST00000430330 938 ntTSL 2 BASIC8.19□□□□□ -1.1
TOP2AP11388 OR4C10P-201ENST00000434991 931 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC8.19□□□□□ -1.1
TOP2AP11388 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 AC041039.1-201ENST00000485656 536 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 EEF1A1P25-201ENST00000495704 1267 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOP2AP11388 MTCO1P35-201ENST00000515270 228 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TOP2AP11388 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC8.19□□□□□ -1.1
TOP2AP11388 AL020997.2-201ENST00000602607 184 ntBASIC8.19□□□□□ -1.1
TOP2AP11388 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC8.18□□□□□ -1.1
TOP2AP11388 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC8.18□□□□□ -1.1
TOP2AP11388 MFSD8-220ENST00000641243 1422 ntBASIC8.18□□□□□ -1.1
TOP2AP11388 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
TOP2AP11388 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC8.18□□□□□ -1.1
TOP2AP11388 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
TOP2AP11388 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.18□□□□□ -1.1
TOP2AP11388 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC8.18□□□□□ -1.1
TOP2AP11388 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.18□□□□□ -1.1
TOP2AP11388 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TOP2AP11388 AP000580.1-201ENST00000404439 358 ntBASIC8.18□□□□□ -1.1
TOP2AP11388 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC8.18□□□□□ -1.1
TOP2AP11388 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.18□□□□□ -1.1
TOP2AP11388 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.18□□□□□ -1.1
TOP2AP11388 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.18□□□□□ -1.1
TOP2AP11388 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.18□□□□□ -1.1
TOP2AP11388 MAPK10-328ENST00000641553 4009 ntBASIC8.18□□□□□ -1.1
TOP2AP11388 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TOP2AP11388 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TOP2AP11388 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TOP2AP11388 RNA5SP388-201ENST00000362584 119 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms