Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 AL603750.1-201ENST00000624216 1717 ntBASIC3.94□□□□□ -1.78
CD28P10747 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.94□□□□□ -1.78
CD28P10747 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CD28P10747 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 RNU6-249P-201ENST00000363016 102 ntBASIC3.93□□□□□ -1.78
CD28P10747 AL589994.1-201ENST00000404962 340 ntBASIC3.93□□□□□ -1.78
CD28P10747 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 AF186996.5-201ENST00000418098 904 ntBASIC3.93□□□□□ -1.78
CD28P10747 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.93□□□□□ -1.78
CD28P10747 RPL12P43-201ENST00000420608 499 ntBASIC3.93□□□□□ -1.78
CD28P10747 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.93□□□□□ -1.78
CD28P10747 RPL19P16-201ENST00000433839 588 ntBASIC3.93□□□□□ -1.78
CD28P10747 BTG3P1-201ENST00000435859 716 ntBASIC3.93□□□□□ -1.78
CD28P10747 TCEA1P1-201ENST00000449716 880 ntBASIC3.93□□□□□ -1.78
CD28P10747 TPT1P13-201ENST00000449760 499 ntBASIC3.93□□□□□ -1.78
CD28P10747 OR52J1P-201ENST00000450596 932 ntBASIC3.93□□□□□ -1.78
CD28P10747 IGHV5-78-201ENST00000450948 295 ntBASIC3.93□□□□□ -1.78
CD28P10747 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 TRBV8-1-201ENST00000481590 279 ntBASIC3.93□□□□□ -1.78
CD28P10747 RN7SL814P-201ENST00000487715 300 ntBASIC3.93□□□□□ -1.78
CD28P10747 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 MRPS33P2-201ENST00000507850 322 ntBASIC3.93□□□□□ -1.78
CD28P10747 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.93□□□□□ -1.78
CD28P10747 FTH1P11-201ENST00000517577 551 ntBASIC3.93□□□□□ -1.78
CD28P10747 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.93□□□□□ -1.78
CD28P10747 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 AC063949.1-201ENST00000552900 865 ntBASIC3.93□□□□□ -1.78
CD28P10747 BGLT3-201ENST00000564523 994 ntBASIC3.93□□□□□ -1.78
CD28P10747 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 EIF1P5-201ENST00000585002 234 ntBASIC3.93□□□□□ -1.78
CD28P10747 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 AC026367.3-201ENST00000619032 590 ntBASIC3.93□□□□□ -1.78
CD28P10747 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.93□□□□□ -1.78
CD28P10747 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.93□□□□□ -1.78
CD28P10747 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 CDC27P2-201ENST00000425026 1922 ntBASIC3.93□□□□□ -1.78
CD28P10747 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 AC233968.1-201ENST00000611212 1300 ntBASIC3.93□□□□□ -1.78
CD28P10747 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD28P10747 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.93□□□□□ -1.78
CD28P10747 AC093849.1-201ENST00000563631 2209 ntBASIC3.93□□□□□ -1.78
CD28P10747 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CD28P10747 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CD28P10747 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.92□□□□□ -1.78
CD28P10747 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 AC245100.2-201ENST00000454544 1679 ntBASIC3.92□□□□□ -1.78
CD28P10747 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD28P10747 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CD28P10747 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.92□□□□□ -1.78
CD28P10747 SNORA2.3-201ENST00000383920 135 ntBASIC3.92□□□□□ -1.78
CD28P10747 RNA5SP241-201ENST00000391326 114 ntBASIC3.92□□□□□ -1.78
CD28P10747 AL021331.1-201ENST00000402817 582 ntBASIC3.92□□□□□ -1.78
CD28P10747 AC016397.1-201ENST00000412463 242 ntBASIC3.92□□□□□ -1.78
CD28P10747 AL121878.1-201ENST00000418638 859 ntBASIC3.92□□□□□ -1.78
CD28P10747 AL034379.1-201ENST00000423216 253 ntBASIC3.92□□□□□ -1.78
CD28P10747 HMGB1P32-201ENST00000425971 565 ntBASIC3.92□□□□□ -1.78
CD28P10747 HMGN2P27-201ENST00000427352 270 ntBASIC3.92□□□□□ -1.78
CD28P10747 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.92□□□□□ -1.78
CD28P10747 TCEA1P3-201ENST00000443005 880 ntBASIC3.92□□□□□ -1.78
CD28P10747 OR7E125P-201ENST00000443450 846 ntBASIC3.92□□□□□ -1.78
CD28P10747 AC009220.1-201ENST00000451614 275 ntBASIC3.92□□□□□ -1.78
CD28P10747 AC091180.1-201ENST00000462104 372 ntBASIC3.92□□□□□ -1.78
CD28P10747 AP002371.1-201ENST00000463604 433 ntBASIC3.92□□□□□ -1.78
CD28P10747 SEPT10P1-201ENST00000517342 1162 ntBASIC3.92□□□□□ -1.78
CD28P10747 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms