Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNORA73.1-201ENST00000363107 205 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 RNU6-729P-201ENST00000384399 107 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 LRRC37BP1-201ENST00000398851 714 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 MIR921-201ENST00000401133 56 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL080315.1-201ENST00000406055 466 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 LINC00993-201ENST00000420453 540 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 Z74021.1-201ENST00000423610 407 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 AC092162.1-201ENST00000432828 434 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 AL161636.2-201ENST00000445179 927 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 EEF1B2P6-201ENST00000445713 673 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 AC239798.3-201ENST00000454459 408 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 SEPT14P1-201ENST00000458703 648 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 EIF1P7-201ENST00000487533 337 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 EIF4E2P2-201ENST00000492033 736 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL1P09341 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CXCL1P09341 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL1P09341 AC027455.1-201ENST00000574104 594 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AC138207.8-204ENST00000579588 527 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AC209154.1-201ENST00000582156 337 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 AC087783.2-201ENST00000605070 562 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AC131238.1-201ENST00000617135 328 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL683826.1-201ENST00000624104 627 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AC073592.6-201ENST00000624271 415 ntBASIC3.74□□□□□ -1.81
CXCL1P09341 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
CXCL1P09341 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL1P09341 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.73□□□□□ -1.81
CXCL1P09341 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CXCL1P09341 AL445487.1-201ENST00000415694 1580 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CXCL1P09341 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 RNA5SP335-201ENST00000363817 110 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 RN7SKP171-201ENST00000364417 303 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 SNORA70-201ENST00000384436 135 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 RN7SKP167-201ENST00000411047 285 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 RPS4XP16-201ENST00000427198 791 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC002504.1-201ENST00000438281 691 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 RN7SL443P-201ENST00000464331 290 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 RPL23AP65-201ENST00000475608 468 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 RPL7P6-201ENST00000480903 738 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AC012158.1-204ENST00000483430 465 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 RN7SL214P-201ENST00000487317 265 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 Y_RNA.719-201ENST00000517156 106 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 RNA5SP373-201ENST00000517271 95 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.73□□□□□ -1.81
CXCL1P09341 ARGFXP2-201ENST00000579304 949 ntBASIC3.73□□□□□ -1.81
CXCL1P09341 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.73□□□□□ -1.81
CXCL1P09341 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL1P09341 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms