Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC112694.2-201ENST00000623697 768 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC004943.3-201ENST00000624116 600 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC135068.12-201ENST00000637370 931 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC100757.1-201ENST00000616872 1835 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DOAP06340 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DOAP06340 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 U3.3-201ENST00000362986 216 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DOAP06340 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DOAP06340 CHMP1B2P-201ENST00000399581 597 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 VN1R51P-201ENST00000411675 945 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AL592310.1-201ENST00000414330 671 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC115285.1-201ENST00000424879 736 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AL590762.4-201ENST00000425885 253 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 PSMD10P3-201ENST00000437000 448 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 MTCYBP31-201ENST00000438855 1122 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC093663.2-201ENST00000484625 313 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 SUMO2P5-201ENST00000506790 245 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC105313.1-201ENST00000509121 353 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC004980.4-201ENST00000513375 203 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 SNORA19.3-201ENST00000516165 130 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 OR8Q1P-201ENST00000526467 655 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 UBTFL10-201ENST00000528532 562 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AP002373.2-201ENST00000541631 1060 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC092868.3-201ENST00000560515 784 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC010547.7-201ENST00000570323 333 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 NIFKP6-201ENST00000598115 845 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 AC011492.1-201ENST00000600023 315 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 HMGB1P51-201ENST00000605166 638 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 CYCSP41-201ENST00000616920 296 ntBASIC6.24□□□□□ -1.41
HLA-DOAP06340 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DOAP06340 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HLA-DOAP06340 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.24□□□□□ -1.41
HLA-DOAP06340 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC006206.1-201ENST00000544842 3387 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 SCARNA15-201ENST00000607520 4325 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 OR8V1P-201ENST00000395193 873 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 MTCO2P31-201ENST00000402702 684 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 XKRYP1-201ENST00000423438 492 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 RBMY2QP-201ENST00000429799 1147 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 MTCO1P45-201ENST00000431457 267 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 XKRYP2-201ENST00000432915 492 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-DOAP06340 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 AL772161.1-201ENST00000439130 476 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC092647.2-201ENST00000452998 253 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 MTCO1P31-201ENST00000506355 492 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 FABP5P6-201ENST00000510588 409 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-DOAP06340 NPM1P52-201ENST00000518264 846 ntBASIC6.23□□□□□ -1.41
HLA-DOAP06340 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms