Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHOX2O60902 MIR133B-201ENST00000362210 119 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 RN7SKP162-201ENST00000363605 345 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.93□□□□□ -1.62
SHOX2O60902 MIR105-1-201ENST00000385222 81 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AL031985.1-201ENST00000392713 418 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 SNORA77-201ENST00000408716 125 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 SNORA11-201ENST00000408789 128 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 OR6E1P-201ENST00000414424 923 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.93□□□□□ -1.62
SHOX2O60902 BX119904.1-201ENST00000432026 348 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 BX323845.1-201ENST00000432417 179 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.93□□□□□ -1.62
SHOX2O60902 LDHBP2-201ENST00000456969 1005 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AC231760.1-201ENST00000498002 260 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.93□□□□□ -1.62
SHOX2O60902 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.93□□□□□ -1.62
SHOX2O60902 AC012339.2-201ENST00000523996 453 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.93□□□□□ -1.62
SHOX2O60902 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.93□□□□□ -1.62
SHOX2O60902 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.93□□□□□ -1.62
SHOX2O60902 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.93□□□□□ -1.62
SHOX2O60902 IGBP1P1-201ENST00000554337 1009 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.93□□□□□ -1.62
SHOX2O60902 AC015912.2-201ENST00000571053 181 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.93□□□□□ -1.62
SHOX2O60902 AC005377.1-201ENST00000605126 456 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 MIR6748-201ENST00000610433 71 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AL353726.1-201ENST00000614041 1000 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AC022467.1-201ENST00000614738 749 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AL121873.1-201ENST00000616013 524 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AC067931.1-201ENST00000624190 671 ntBASIC4.93□□□□□ -1.62
SHOX2O60902 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.93□□□□□ -1.62
SHOX2O60902 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.93□□□□□ -1.62
SHOX2O60902 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHOX2O60902 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SHOX2O60902 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHOX2O60902 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 AC027279.1-201ENST00000568885 4284 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 RN7SKP113-201ENST00000363891 295 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 RNU4-2-201ENST00000365668 141 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 RHOT1P2-201ENST00000366423 333 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 HMGN1P20-201ENST00000411849 300 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 GABARAPL3-201ENST00000412799 354 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.92□□□□□ -1.62
SHOX2O60902 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 EI24P4-201ENST00000423683 1078 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 Z84478.1-201ENST00000438230 1219 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 SUMO2P3-201ENST00000438311 288 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 AL353748.1-201ENST00000440753 474 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 RPL7P33-201ENST00000444159 742 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.92□□□□□ -1.62
SHOX2O60902 SEPT7P3-201ENST00000455017 621 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 RN7SL443P-201ENST00000464331 290 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 AC025445.1-201ENST00000502728 300 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.92□□□□□ -1.62
SHOX2O60902 Y_RNA.719-201ENST00000517156 106 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.92□□□□□ -1.62
SHOX2O60902 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.92□□□□□ -1.62
SHOX2O60902 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.92□□□□□ -1.62
SHOX2O60902 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 AC012557.1-201ENST00000607115 611 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 SDR42E1P1-201ENST00000611327 477 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.92□□□□□ -1.62
SHOX2O60902 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.92□□□□□ -1.62
SHOX2O60902 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.92□□□□□ -1.62
SHOX2O60902 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.92□□□□□ -1.62
SHOX2O60902 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHOX2O60902 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SHOX2O60902 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 AL445487.1-201ENST00000415694 1580 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHOX2O60902 MAPK10-253ENST00000641010 4072 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.91□□□□□ -1.62
SHOX2O60902 MAPK10-303ENST00000641324 3959 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHOX2O60902 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHOX2O60902 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 AC023490.2-201ENST00000359859 470 ntBASIC4.91□□□□□ -1.62
SHOX2O60902 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHOX2O60902 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms