Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX3O60493 RN7SKP184-201ENST00000362348 333 ntBASIC4.93□□□□□ -1.62
SNX3O60493 SNORA73.1-201ENST00000363107 205 ntBASIC4.93□□□□□ -1.62
SNX3O60493 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SNX3O60493 RNU6-1320P-201ENST00000390838 107 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RNU6-1269P-201ENST00000391139 107 ntBASIC4.93□□□□□ -1.62
SNX3O60493 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 U3.35-201ENST00000408405 208 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AL139158.1-201ENST00000424719 340 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AL662874.1-201ENST00000426065 230 ntBASIC4.93□□□□□ -1.62
SNX3O60493 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX3O60493 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX3O60493 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX3O60493 CYCSP53-201ENST00000455540 265 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RNU6-599P-201ENST00000459383 107 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RNU6-1193P-201ENST00000459461 107 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RN7SL517P-201ENST00000462240 305 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AL049829.1-201ENST00000465411 156 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RPL29P23-201ENST00000486188 442 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RPS4XP18-201ENST00000495480 763 ntBASIC4.93□□□□□ -1.62
SNX3O60493 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX3O60493 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX3O60493 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX3O60493 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX3O60493 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX3O60493 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX3O60493 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX3O60493 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX3O60493 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX3O60493 AC233280.2-201ENST00000603917 1070 ntBASIC4.93□□□□□ -1.62
SNX3O60493 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AC026979.4-201ENST00000606555 645 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AL451049.1-201ENST00000608672 497 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AC019131.2-201ENST00000609071 870 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RNU6-368P-201ENST00000620928 107 ntBASIC4.93□□□□□ -1.62
SNX3O60493 RNU6-538P-201ENST00000622329 107 ntBASIC4.93□□□□□ -1.62
SNX3O60493 AC004232.3-201ENST00000622977 525 ntBASIC4.93□□□□□ -1.62
SNX3O60493 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX3O60493 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SNX3O60493 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX3O60493 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
SNX3O60493 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX3O60493 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX3O60493 AC092435.4-201ENST00000623012 4159 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AL138820.1-201ENST00000617901 5305 ntBASIC4.92□□□□□ -1.62
SNX3O60493 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX3O60493 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX3O60493 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX3O60493 KARSP1-201ENST00000451871 1752 ntBASIC4.92□□□□□ -1.62
SNX3O60493 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNX3O60493 Y_RNA.110-201ENST00000363220 99 ntBASIC4.92□□□□□ -1.62
SNX3O60493 RNU1-20P-201ENST00000363314 162 ntBASIC4.92□□□□□ -1.62
SNX3O60493 SNORD115-48-201ENST00000364764 76 ntBASIC4.92□□□□□ -1.62
SNX3O60493 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX3O60493 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX3O60493 MIR191-201ENST00000384873 92 ntBASIC4.92□□□□□ -1.62
SNX3O60493 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 RANP4-201ENST00000413361 655 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 RPL21P108-201ENST00000413857 481 ntBASIC4.92□□□□□ -1.62
SNX3O60493 Z93019.1-201ENST00000416450 973 ntBASIC4.92□□□□□ -1.62
SNX3O60493 BTF3P9-201ENST00000418784 283 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX3O60493 NPM1P22-201ENST00000427761 952 ntBASIC4.92□□□□□ -1.62
SNX3O60493 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SNX3O60493 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 AC093716.1-201ENST00000435923 377 ntBASIC4.92□□□□□ -1.62
SNX3O60493 MTCYBP29-201ENST00000436327 1006 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC073587.1-201ENST00000447093 876 ntBASIC4.92□□□□□ -1.62
SNX3O60493 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 RPL5P13-201ENST00000462840 709 ntBASIC4.92□□□□□ -1.62
SNX3O60493 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX3O60493 AC025458.1-201ENST00000506046 166 ntBASIC4.92□□□□□ -1.62
SNX3O60493 STMN1P2-201ENST00000508435 439 ntBASIC4.92□□□□□ -1.62
SNX3O60493 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX3O60493 MRPS5P3-201ENST00000515577 166 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC012400.1-201ENST00000518452 381 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC116917.1-201ENST00000520558 305 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC068305.2-201ENST00000550567 1205 ntBASIC4.92□□□□□ -1.62
SNX3O60493 BLZF2P-201ENST00000553776 1130 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX3O60493 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX3O60493 ATP5J2P6-201ENST00000565203 266 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC104687.2-201ENST00000604442 342 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AL450270.1-201ENST00000606160 391 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC005972.3-201ENST00000606304 481 ntBASIC4.92□□□□□ -1.62
SNX3O60493 AC242628.1-201ENST00000606810 391 ntBASIC4.92□□□□□ -1.62
SNX3O60493 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms