Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 YRDCP3-201ENST00000456507 480 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 RPS27AP2-201ENST00000457576 465 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 RPS23P2-201ENST00000463671 415 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC069528.1-202ENST00000482888 637 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC004815.1-201ENST00000484185 331 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC093890.1-201ENST00000502554 540 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC108471.1-201ENST00000513977 287 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 SCARNA18.1-201ENST00000516330 83 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC007956.1-201ENST00000555623 542 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC009097.3-201ENST00000563557 1018 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AP001437.1-201ENST00000608783 456 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 MIR6793-201ENST00000612376 63 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AC021755.4-201ENST00000616620 456 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 BNIP3P41-202ENST00000616656 861 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 Z99129.2-201ENST00000619967 314 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AP002791.1-201ENST00000623291 381 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 AP000550.3-201ENST00000637734 379 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.66□□□□□ -1.5
PHGDHO43175 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 LYARP1-201ENST00000436977 1501 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 COX6B1P3-201ENST00000312310 260 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PHGDHO43175 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 RNU6-225P-201ENST00000384613 103 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC005042.1-201ENST00000393397 800 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC126120.1-201ENST00000431082 470 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 MED28P3-201ENST00000444288 531 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 Z77249.1-201ENST00000444622 1175 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC005410.1-202ENST00000460347 485 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC068228.1-201ENST00000461723 211 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 RPL32P33-201ENST00000487023 394 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC122718.2-201ENST00000505325 591 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.65□□□□□ -1.5
PHGDHO43175 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC084121.1-201ENST00000533882 835 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.65□□□□□ -1.5
PHGDHO43175 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 MTND4P33-201ENST00000556706 766 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.65□□□□□ -1.5
PHGDHO43175 CYCSP38-201ENST00000559840 322 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.65□□□□□ -1.5
PHGDHO43175 MTCO1P40-201ENST00000574371 625 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC008507.3-201ENST00000585753 472 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC125494.2-201ENST00000602431 657 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.65□□□□□ -1.5
PHGDHO43175 AC009237.15-201ENST00000610252 501 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AL138478.1-201ENST00000612252 832 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PHGDHO43175 AC109454.4-201ENST00000623411 649 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC120349.3-201ENST00000624377 529 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC019226.2-201ENST00000625973 424 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AC136428.4-201ENST00000634254 1155 ntBASIC5.65□□□□□ -1.5
PHGDHO43175 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms