Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ECM1P2-201ENST00000503354 1577 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 NPM1P52-201ENST00000518264 846 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 DUX4L52-201ENST00000549363 777 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 TVP23CP2-201ENST00000571473 623 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN3O15551 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN3O15551 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 AP001521.2-201ENST00000608772 546 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 BX323046.1-201ENST00000610145 535 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 NF1P10-201ENST00000613227 742 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.44□□□□□ -1.54
CLDN3O15551 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN3O15551 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 AL022322.2-201ENST00000624072 20397 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 AL031595.2-201ENST00000624215 19071 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 AC100778.3-201ENST00000580060 1750 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN3O15551 RNU6-1263P-201ENST00000384601 106 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 LRRC37BP1-201ENST00000398851 714 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 RPS26P13-201ENST00000419030 330 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 OR2AM1P-201ENST00000422137 422 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 MTCO1P51-201ENST00000427672 1060 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN3O15551 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN3O15551 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN3O15551 RPL7AP61-201ENST00000443410 636 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.43□□□□□ -1.54
CLDN3O15551 AL691482.1-201ENST00000453255 87 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 HIGD1AP8-201ENST00000453927 274 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN3O15551 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 MRPS33P2-201ENST00000507850 322 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 AC025857.1-201ENST00000525252 377 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 PCNPP1-201ENST00000552501 511 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 EDDM3DP-201ENST00000554692 434 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.43□□□□□ -1.54
CLDN3O15551 AL122125.1-201ENST00000616999 600 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLDN3O15551 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 MTCO1P15-201ENST00000529569 1526 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
CLDN3O15551 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.43□□□□□ -1.54
CLDN3O15551 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.43□□□□□ -1.54
CLDN3O15551 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLDN3O15551 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN3O15551 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CLDN3O15551 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CLDN3O15551 EI24P3-201ENST00000399046 1062 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 SNORA79B-201ENST00000410557 148 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN3O15551 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN3O15551 AC106901.1-201ENST00000425086 698 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 RPL7P11-201ENST00000437586 658 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 PA2G4P6-201ENST00000438325 1197 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN3O15551 AC112498.1-201ENST00000444401 332 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN3O15551 CYCSP24-201ENST00000445119 316 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 RPL31P44-201ENST00000447680 377 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN3O15551 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN3O15551 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN3O15551 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN3O15551 MORF4L2P1-201ENST00000503761 858 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 MTCO3P42-201ENST00000509488 518 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 MTCO3P39-201ENST00000514812 518 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN3O15551 MIR4436B2-201ENST00000581415 91 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 MIR4436B1-201ENST00000583272 91 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 AC005084.1-201ENST00000605160 304 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 AL049794.2-201ENST00000616301 365 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN3O15551 TTC39DP-201ENST00000416781 1688 ntBASIC5.42□□□□□ -1.54
CLDN3O15551 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms