Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TMEM88BA6NKF7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MTCO1P23-201ENST00000415223 1526 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 CR383658.2-201ENST00000547576 1525 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 RPL21P132-201ENST00000331267 462 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 FAM32BP-201ENST00000344033 333 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MIR137-201ENST00000385223 102 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MTND1P23-201ENST00000416931 372 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC062016.2-201ENST00000420950 676 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 BX323845.3-201ENST00000428215 527 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC073069.1-201ENST00000428657 441 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 FMO7P-201ENST00000436045 768 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC091862.1-201ENST00000438016 1100 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC241584.1-201ENST00000438469 1241 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AL353572.1-201ENST00000442490 417 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 CRYGGP-201ENST00000443337 145 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC023271.1-201ENST00000445936 1090 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC104763.1-201ENST00000475274 360 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 RN7SL326P-201ENST00000477493 296 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC015724.1-201ENST00000478577 156 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 RPL7P38-201ENST00000488396 739 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 DUTP7-201ENST00000507982 486 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC008802.1-201ENST00000519121 791 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AL133241.1-201ENST00000556832 487 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 NPM1P47-201ENST00000560843 856 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 MTND1P15-201ENST00000579262 949 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AP005119.1-201ENST00000580956 292 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC087575.1-201ENST00000585087 229 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 RNU6-88P-201ENST00000606801 100 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AP001596.2-201ENST00000608410 312 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AP000577.1-201ENST00000624366 878 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AL357562.1-201ENST00000624911 609 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 AC235565.1-201ENST00000456962 1325 ntBASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TMEM88BA6NKF7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 WDR95P-201ENST00000425638 1542 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AC087501.5-201ENST00000607496 2374 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 RNA5SP65-201ENST00000363166 119 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 RNU6-501P-201ENST00000364072 100 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AK4P4-201ENST00000419465 646 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AC093155.2-201ENST00000420734 937 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 MRPS10P2-201ENST00000431226 381 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL031663.1-201ENST00000437445 219 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL512286.1-201ENST00000439244 400 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 RPL21P133-201ENST00000443666 476 ntBASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC7.47□□□□□ -1.21
TMEM88BA6NKF7 YWHAQP9-201ENST00000445891 512 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms