Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC006116.3-201ENST00000592968 361 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL445222.1-201ENST00000607259 628 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC009163.6-201ENST00000612367 342 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL158062.1-201ENST00000619632 745 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC074140.1-201ENST00000621617 208 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC097461.1-201ENST00000568928 2821 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 OR1L6-202ENST00000373684 1044 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AL672167.2-201ENST00000377164 879 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RNU6-152P-201ENST00000384037 107 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RNA5SP241-201ENST00000391326 114 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 GAPDHP15-201ENST00000398586 975 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 SEPT7P8-201ENST00000413308 775 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RPL23AP27-201ENST00000415161 451 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 PTMAP6-201ENST00000439110 327 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AL606490.8-201ENST00000441624 319 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC090114.3-201ENST00000479267 829 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RN7SL814P-201ENST00000487715 300 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC023424.1-201ENST00000496058 459 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RN7SL808P-201ENST00000496066 299 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 IMPA1P1-201ENST00000510718 842 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AP002373.2-201ENST00000541631 1060 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AL358913.1-201ENST00000554342 121 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AL121839.1-201ENST00000556233 1185 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 RN7SL290P-201ENST00000578661 300 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC098483.2-201ENST00000603158 454 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC067838.1-201ENST00000606064 577 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC135803.1-201ENST00000608748 565 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC118658.2-201ENST00000618697 459 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 LINC01739-205ENST00000641890 573 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 SCARNA15-201ENST00000607520 4325 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC068446.1-201ENST00000556425 1549 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AL022311.1-201ENST00000623726 19416 ntBASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SNX9Q9Y5X1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AL450345.1-202ENST00000605741 3881 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 RNU6-249P-201ENST00000363016 102 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 RNU6-1331P-201ENST00000363658 106 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 RNU1-74P-201ENST00000384108 171 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 GPS2P1-201ENST00000411761 986 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC079809.1-201ENST00000415468 276 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC096644.3-201ENST00000416788 338 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ELOCP6-201ENST00000429066 328 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 ELOCP12-201ENST00000458706 328 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC015908.1-201ENST00000478739 476 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 AC109462.1-201ENST00000491087 368 ntBASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX9Q9Y5X1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms