Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC005410.1-202ENST00000460347 485 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC069528.1-202ENST00000482888 637 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC011037.1-201ENST00000483964 558 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RPL38P3-201ENST00000484463 213 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 COX6B1P2-201ENST00000489624 230 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AP003080.1-202ENST00000526526 915 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AP000648.1-201ENST00000529682 397 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RPL12P48-201ENST00000605620 304 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL031601.1-201ENST00000605702 394 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL021918.2-201ENST00000613415 194 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 RNU6-729P-201ENST00000384399 107 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 OR3A2-201ENST00000408891 1076 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL365338.1-201ENST00000422282 858 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 RBMY2TP-201ENST00000451162 947 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 RNU1-88P-201ENST00000459274 128 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL122020.1-201ENST00000472287 459 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 SNORA3.4-201ENST00000515969 96 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 MIR2117-201ENST00000516780 80 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 PCNAP4-201ENST00000532690 730 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 OSBPL9P5-201ENST00000542581 171 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC025260.1-201ENST00000548858 430 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC010547.6-201ENST00000571789 193 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 TXNP4-201ENST00000575018 310 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 MIR1273E-201ENST00000581165 102 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL589674.2-201ENST00000604304 337 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC016877.3-201ENST00000606778 504 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AL135786.2-201ENST00000608422 615 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 AC007342.8-201ENST00000623278 678 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 MIR193BHG-214ENST00000641765 509 ntBASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
PCDHB1Q9Y5F3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.84□□□□□ -1.48
PCDHB1Q9Y5F3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms