Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 RN7SKP67-201ENST00000515905 235 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 MIR1269B-201ENST00000580405 75 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 MIR4443-201ENST00000585052 53 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC015849.2-201ENST00000605738 409 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC211433.2-201ENST00000608433 387 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC008115.4-201ENST00000619780 775 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC079416.3-201ENST00000624479 549 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC093671.1-201ENST00000624981 2929 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC006484.1-201ENST00000435086 1884 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 MIR551A-201ENST00000385042 96 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 MIR130A-201ENST00000385274 89 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-1320P-201ENST00000390838 107 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-1269P-201ENST00000391139 107 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL158050.1-201ENST00000416077 457 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 MTCO3P4-201ENST00000419236 787 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 MTCO1P45-201ENST00000431457 267 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RPL7P55-201ENST00000450522 746 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RANP1-206ENST00000455094 651 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-599P-201ENST00000459383 107 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-1193P-201ENST00000459461 107 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RN7SL30P-201ENST00000488416 306 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC015864.1-201ENST00000496512 544 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC090638.1-201ENST00000498296 909 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC091163.3-201ENST00000518269 1144 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC007834.2-201ENST00000536310 343 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AGGF1P7-201ENST00000562369 913 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 FKBP1AP1-201ENST00000594588 318 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 SUGT1P3-202ENST00000604259 383 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-368P-201ENST00000620928 107 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-538P-201ENST00000622329 107 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL512506.2-201ENST00000624472 458 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTDP1Q9Y5B0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
CTDP1Q9Y5B0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CTDP1Q9Y5B0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTDP1Q9Y5B0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms