Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 ZNF969P-201ENST00000510345 2341 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC068533.1-201ENST00000418542 415 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC011998.1-201ENST00000433403 117 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 CYCSP43-201ENST00000438233 310 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC053481.4-201ENST00000583164 216 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC007342.8-201ENST00000623278 678 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 AC120036.2-201ENST00000509729 1474 ntBASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC7.58□□□□□ -1.2
RIMBP3Q9UFD9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 MIR200C-201ENST00000384980 68 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 RPL23AP38-201ENST00000423801 469 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 TCEA1P3-201ENST00000443005 880 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AL500522.2-201ENST00000448562 343 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AL691482.1-201ENST00000453255 87 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AC026427.2-201ENST00000506228 536 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 RN7SL652P-201ENST00000577769 300 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AC020978.9-201ENST00000624380 1141 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 AC022164.1-201ENST00000568767 2673 ntBASIC7.57□□□□□ -1.2
RIMBP3Q9UFD9 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 HMGN1P9-201ENST00000515212 298 ntBASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 AL035246.1-201ENST00000433554 1255 ntBASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
RIMBP3Q9UFD9 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AC073346.2-201ENST00000624724 2058 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 BRD7P6-201ENST00000431406 1860 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 UBE2Q2P12-201ENST00000414573 204 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 LINC00993-201ENST00000420453 540 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AL356276.2-201ENST00000435919 558 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AC007967.1-201ENST00000455422 1159 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AC037471.2-201ENST00000564941 598 ntBASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.55□□□□□ -1.2
RIMBP3Q9UFD9 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIMBP3Q9UFD9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIMBP3Q9UFD9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIMBP3Q9UFD9 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms