Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 RN7SKP113-201ENST00000363891 295 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AC234781.4-201ENST00000419384 244 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 Z80107.2-201ENST00000445127 392 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 MTND6P5-201ENST00000448266 512 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 RPS3AP53-201ENST00000454716 778 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 OR2A3P-201ENST00000493774 953 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AC140172.1-201ENST00000502928 141 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 RNA5SP43-201ENST00000516559 110 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 MIR4480-201ENST00000582492 71 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 MEMO1P5-201ENST00000604810 406 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 FAM25E-202ENST00000608562 189 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AC112694.2-201ENST00000623697 768 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 AL672167.1-204ENST00000641875 3017 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC092111.2-201ENST00000611627 1414 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 RN7SKP16-201ENST00000410180 299 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC009238.2-201ENST00000431026 355 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC046176.1-201ENST00000435260 1170 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC006466.1-201ENST00000438721 289 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 IGHV5-78-201ENST00000450948 295 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 BX842559.2-201ENST00000451418 605 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 RPL7P16-201ENST00000479738 738 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 RPL5P22-201ENST00000480199 884 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 RPS23P1-201ENST00000491662 432 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC105233.1-201ENST00000498840 781 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 BTF3P13-201ENST00000513224 490 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AL671862.1-201ENST00000515851 349 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 PCNPP1-201ENST00000552501 511 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AL356752.1-201ENST00000615844 593 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC087385.3-201ENST00000620477 187 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC091953.3-201ENST00000623220 236 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 AC073869.10-201ENST00000642016 354 ntBASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLIP2Q9UDT6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 PCAT14-202ENST00000627127 3935 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 SNORA2.3-201ENST00000383920 135 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 AL390316.1-201ENST00000406279 553 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 SETP10-201ENST00000424368 814 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 PRPF38AP2-201ENST00000438179 851 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 TCEA1P1-201ENST00000449716 880 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 RN7SL319P-201ENST00000480656 221 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 RN7SL591P-201ENST00000496150 292 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 MIR4700-201ENST00000578311 74 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 MIR3936-201ENST00000584304 110 ntBASIC5.93□□□□□ -1.46
CLIP2Q9UDT6 AC005084.1-201ENST00000605160 304 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms