Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NPIPB14P-203ENST00000532298 987 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 CENPUP2-201ENST00000555897 1186 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ANP32BP1-202ENST00000568553 737 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC127024.5-201ENST00000580085 462 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 MRPL57P1-201ENST00000621486 265 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AOX3P-204ENST00000491025 2107 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SSU72Q9NP77 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SSU72Q9NP77 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSU72Q9NP77 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSU72Q9NP77 MTCO1P23-201ENST00000415223 1526 ntBASIC6.46□□□□□ -1.37
SSU72Q9NP77 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSU72Q9NP77 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSU72Q9NP77 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 TMSB4XP2-201ENST00000335179 210 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 RNA5SP514-201ENST00000363717 111 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 RNU5A-6P-201ENST00000384136 116 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 Y_RNA.450-201ENST00000384198 113 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 UBBP1-201ENST00000392399 473 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 RPL7P58-201ENST00000402913 758 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 RN7SKP129-201ENST00000410288 299 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC009237.5-201ENST00000414271 501 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 UBE2V1P14-201ENST00000415815 558 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 BTF3P10-201ENST00000433415 495 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL353093.1-201ENST00000441292 436 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 USP9YP8-201ENST00000441913 500 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 MTATP6P30-201ENST00000443540 664 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC090954.1-201ENST00000445502 361 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 DNAJC19P8-201ENST00000452887 259 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 ARPC3P2-201ENST00000457786 533 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC013267.1-201ENST00000458227 267 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL672167.3-201ENST00000465951 960 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 RPS3AP17-201ENST00000472594 777 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 VPS26AP1-201ENST00000483197 979 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC073522.1-201ENST00000483312 377 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL035690.1-201ENST00000490892 383 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC091951.2-201ENST00000500762 203 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC008628.2-201ENST00000502605 298 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL390198.2-201ENST00000510553 222 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 MAST4-IT1-201ENST00000514241 658 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 OR8L1P-201ENST00000534005 955 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC025260.1-201ENST00000548858 430 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 FAM106CP-201ENST00000582212 507 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC006504.3-201ENST00000586818 523 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC133552.5-201ENST00000604266 540 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AL365503.1-201ENST00000605247 905 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC122710.3-201ENST00000606566 541 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 FRG2MP-201ENST00000613317 856 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC091834.1-201ENST00000614543 472 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 AC010133.1-201ENST00000615809 842 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.46□□□□□ -1.38
SSU72Q9NP77 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SSU72Q9NP77 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSU72Q9NP77 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms