Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 SCARNA20.4-201ENST00000516969 131 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 BRD9P1-201ENST00000529855 560 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 MIR1254-2-201ENST00000579553 63 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC006116.3-201ENST00000592968 361 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AP000769.2-201ENST00000602344 396 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC133552.5-201ENST00000604266 540 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC087783.2-201ENST00000605070 562 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AP001005.3-201ENST00000622049 129 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC011493.1-201ENST00000596753 1632 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 OR14L1P-202ENST00000641545 3009 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AL162456.1-201ENST00000634535 2006 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 MT-RNR2-201ENST00000387347 1559 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 U3.2-201ENST00000362981 210 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 SNORA48.4-201ENST00000391089 134 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 RPL19P16-201ENST00000433839 588 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 TPT1P12-201ENST00000448968 492 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AL450023.1-201ENST00000450868 751 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 VDAC2P4-201ENST00000452925 711 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 RPL5P16-201ENST00000471467 790 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 RPEP1-201ENST00000504507 658 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC113430.1-201ENST00000506872 718 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 RNA5SP303-201ENST00000516192 130 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC011270.1-201ENST00000558606 583 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 RNF138P2-201ENST00000603490 592 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC108738.1-201ENST00000603703 237 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 TAS2R6P-201ENST00000605022 826 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC015914.2-201ENST00000618167 288 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC079298.1-201ENST00000625026 1619 ntBASIC5.18□□□□□ -1.58
TRIM4Q9C037 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM4Q9C037 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM4Q9C037 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 ZNF733P-202ENST00000444809 1573 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 CASC19-281ENST00000642118 1554 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 RNU4-4P-201ENST00000364588 130 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AL390774.1-201ENST00000411924 246 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC007738.1-201ENST00000413892 348 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC245028.1-201ENST00000423259 256 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 IGBP1P3-201ENST00000447449 1000 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 RPS3AP53-201ENST00000454716 778 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 BX284632.1-201ENST00000478218 541 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM4Q9C037 AC126177.5-201ENST00000549599 178 ntBASIC5.17□□□□□ -1.58
TRIM4Q9C037 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms