Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC115286.1-201ENST00000604298 434 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC024941.1-201ENST00000612250 334 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC007786.3-201ENST00000615154 596 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC120338.1-201ENST00000625074 1541 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL442639.1-201ENST00000625030 1899 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL354766.1-201ENST00000423396 542 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 HMGB1P23-201ENST00000518743 568 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AP001781.1-201ENST00000530977 207 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL049839.1-201ENST00000556151 657 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC002044.3-201ENST00000623314 541 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC007382.1-201ENST00000624376 2618 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 MIR133A2-201ENST00000347538 102 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 RPL19P16-201ENST00000433839 588 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AL359265.1-201ENST00000440296 795 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 RN7SL197P-201ENST00000466981 299 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 CR383656.1-201ENST00000484916 377 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC084783.1-201ENST00000565846 910 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC106785.1-201ENST00000565935 262 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 MIR5699-201ENST00000578903 90 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 MIR3138-201ENST00000585238 82 ntBASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCAPERQ9BY12 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SCAPERQ9BY12 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 MIR23B-201ENST00000384832 97 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 RAD23BP1-201ENST00000421404 1227 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 COX6CP13-201ENST00000428703 226 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 FHP1-201ENST00000442741 703 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 RN7SL604P-201ENST00000492589 296 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AC091868.1-201ENST00000508746 304 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AL162574.1-201ENST00000615702 950 ntBASIC7.33□□□□□ -1.24
SCAPERQ9BY12 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SCAPERQ9BY12 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 RAD17P1-201ENST00000418130 2042 ntBASIC7.32□□□□□ -1.24
SCAPERQ9BY12 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCAPERQ9BY12 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms