Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 MTCO1P25-201ENST00000414449 1799 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC090181.3-201ENST00000624777 1514 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 BRD7P1-201ENST00000557705 1915 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AL669831.5-218ENST00000591702 1873 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC025809.2-201ENST00000625085 1802 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 RNU6-839P-201ENST00000363347 108 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 RNU6-549P-201ENST00000384433 107 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 PIGPP2-201ENST00000411569 458 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 FAM183DP-201ENST00000421987 399 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AL022238.1-201ENST00000442557 355 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC007537.2-201ENST00000472093 511 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 RPL7P24-201ENST00000493052 752 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC019235.1-201ENST00000503847 207 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC122718.2-201ENST00000505325 591 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC111000.3-201ENST00000508057 576 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC110792.2-201ENST00000510278 224 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC009646.1-201ENST00000510455 318 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC044913.1-201ENST00000557200 430 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC034268.2-201ENST00000571784 482 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 MIR378C-201ENST00000578683 81 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 MIR3668-201ENST00000582138 75 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC005726.4-201ENST00000582858 458 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC011921.2-201ENST00000589465 152 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AL953862.2-201ENST00000603089 820 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC116312.1-201ENST00000606841 314 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC005021.1-201ENST00000608730 355 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 OR8G7P-201ENST00000616658 848 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 AC122713.2-201ENST00000624942 3335 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 MT-RNR2-201ENST00000387347 1559 ntBASIC6.09□□□□□ -1.43
ATG4DQ86TL0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4DQ86TL0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
ATG4DQ86TL0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
ATG4DQ86TL0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.09□□□□□ -1.44
ATG4DQ86TL0 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ATG4DQ86TL0 AC013488.1-201ENST00000526618 1838 ntBASIC6.09□□□□□ -1.44
ATG4DQ86TL0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 OR4G11P-202ENST00000642116 1414 ntBASIC6.08□□□□□ -1.44
ATG4DQ86TL0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4DQ86TL0 PABPC1P8-201ENST00000452851 2086 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms