Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 MTND4P10-201ENST00000446199 1363 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC005261.4-201ENST00000600047 1385 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RNU4-92P-201ENST00000363783 136 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RNU105B-201ENST00000364478 208 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RN7SKP199-201ENST00000410325 305 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RPF2P1-201ENST00000424137 906 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RAC1P8-201ENST00000427086 527 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC073069.1-201ENST00000428657 441 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RPL12P28-201ENST00000430852 489 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 NANOGP2-201ENST00000435391 727 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC092809.1-201ENST00000441469 474 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL356121.1-201ENST00000442911 156 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL590004.3-202ENST00000445883 451 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 MTND1P31-201ENST00000449206 961 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 FRG2FP-204ENST00000453982 852 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 CEACAMP11-201ENST00000455211 583 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC005410.1-202ENST00000460347 485 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RN7SL72P-201ENST00000460697 269 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC005165.2-201ENST00000466070 380 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 RPL23AP71-201ENST00000470966 469 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 OR7E157P-201ENST00000494376 911 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC005912.1-201ENST00000495392 255 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 OR7E99P-201ENST00000505750 922 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC098799.3-201ENST00000506095 438 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 HMGN1P16-201ENST00000508308 283 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 IGJP1-201ENST00000522682 475 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 OR5AM1P-201ENST00000532136 1032 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC036111.2-201ENST00000533247 901 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC139103.1-201ENST00000534696 1030 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 NIFKP8-201ENST00000560500 874 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL445423.1-201ENST00000609941 536 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL353726.1-201ENST00000614041 1000 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL162574.1-201ENST00000615702 950 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 ZNF663P-202ENST00000641770 1131 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 ADAM5-202ENST00000399789 1942 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC104260.2-201ENST00000623551 3497 ntBASIC5.6□□□□□ -1.51
RNF220Q5VTB9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AC009313.2-201ENST00000417893 1941 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 RNA5SP156-201ENST00000410250 110 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 RPS24P7-201ENST00000416921 246 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 KRR1P1-201ENST00000419430 803 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF220Q5VTB9 CETN4P-201ENST00000432407 469 ntBASIC5.59□□□□□ -1.51
RNF220Q5VTB9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms