Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC093166.2-201ENST00000455969 1017 ntBASIC5.93□□□□□ -1.46
RFX7Q2KHR2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 OR5AN2P-201ENST00000534535 896 ntBASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AP000619.2-201ENST00000546014 969 ntBASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC105129.1-201ENST00000560250 297 ntBASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AF230666.2-201ENST00000602328 725 ntBASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC010424.2-201ENST00000607594 443 ntBASIC5.93□□□□□ -1.46
RFX7Q2KHR2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX7Q2KHR2 ZNF652P1-201ENST00000442420 1309 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC005261.2-201ENST00000593427 4258 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 U3.23-201ENST00000391132 200 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AL357515.1-201ENST00000402967 542 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 RPS4XP9-201ENST00000405151 780 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 TBCAP2-201ENST00000416175 326 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 RPL12P43-201ENST00000420608 499 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC092162.1-201ENST00000432828 434 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC012512.1-201ENST00000446594 718 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 SCARNA22-201ENST00000503991 125 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC008147.3-201ENST00000548666 354 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AC002069.2-201ENST00000603580 883 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 AP001521.2-201ENST00000608772 546 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 MIR7641-1-201ENST00000627518 61 ntBASIC5.92□□□□□ -1.46
RFX7Q2KHR2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFX7Q2KHR2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AC099654.2-201ENST00000433031 1980 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AL034370.1-201ENST00000397254 1590 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AL450345.1-202ENST00000605741 3881 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 U3.30-201ENST00000391308 210 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 RSU1P3-201ENST00000412878 835 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 BX510359.2-201ENST00000417920 305 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 CKS1BP6-201ENST00000424932 240 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 CYCSP11-201ENST00000436426 315 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 GSTA7P-201ENST00000438425 448 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AL356390.1-201ENST00000455684 397 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 RPL23AP56-201ENST00000460778 453 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 MIR4697-201ENST00000582977 78 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AL583832.1-201ENST00000603227 784 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AC006453.5-201ENST00000636451 619 ntBASIC5.91□□□□□ -1.46
RFX7Q2KHR2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFX7Q2KHR2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFX7Q2KHR2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFX7Q2KHR2 GVINP1-202ENST00000531871 7271 ntBASIC5.9□□□□□ -1.46
RFX7Q2KHR2 ZFRP1-201ENST00000457579 2970 ntBASIC5.9□□□□□ -1.46
RFX7Q2KHR2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RFX7Q2KHR2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFX7Q2KHR2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RFX7Q2KHR2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC010928.1-201ENST00000592477 1447 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 RNU1-32P-201ENST00000363937 159 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 RN7SKP186-201ENST00000365371 303 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC119751.6-201ENST00000416712 186 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 OR5M12P-201ENST00000423388 929 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC006967.1-201ENST00000467608 589 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC020890.1-201ENST00000491837 504 ntBASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.9□□□□□ -1.47
RFX7Q2KHR2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms