Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNA1P78396 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CCNA1P78396 IGKV2D-10-201ENST00000520194 281 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 AC136777.2-201ENST00000522979 358 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNA1P78396 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNA1P78396 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.75□□□□□ -1.49
CCNA1P78396 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNA1P78396 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 AC020910.3-201ENST00000603701 874 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 AL713998.2-201ENST00000604538 1198 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNA1P78396 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 AC109446.4-201ENST00000623235 2755 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCNA1P78396 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNA1P78396 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCNA1P78396 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCNA1P78396 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 SNORA77-201ENST00000408716 125 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNA1P78396 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNA1P78396 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNA1P78396 AC091180.1-201ENST00000462104 372 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 AC092905.1-201ENST00000467527 949 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 AC098583.1-201ENST00000480875 255 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 ENPP7P9-201ENST00000514456 627 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 AP002981.1-201ENST00000517692 975 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNA1P78396 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNA1P78396 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNA1P78396 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNA1P78396 MIR5096-201ENST00000583713 70 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 AC091932.2-201ENST00000623014 291 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 AC006840.1-201ENST00000623069 542 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNA1P78396 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNA1P78396 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCNA1P78396 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNA1P78396 AL356317.1-201ENST00000396110 1436 ntBASIC5.74□□□□□ -1.49
CCNA1P78396 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNA1P78396 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCNA1P78396 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCNA1P78396 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
CCNA1P78396 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 RNU6-729P-201ENST00000384399 107 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 SNORA48.4-201ENST00000391089 134 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCNA1P78396 AL390316.1-201ENST00000406279 553 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 GTF2IP5-201ENST00000414608 731 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 BX510359.2-201ENST00000417920 305 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNA1P78396 AC004074.1-201ENST00000421810 1063 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 RPL7AP49-201ENST00000429522 581 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AL591438.1-201ENST00000433508 581 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC138761.5-201ENST00000433967 325 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 RPS29P9-201ENST00000440360 171 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC004980.3-201ENST00000447046 365 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 BX842559.2-201ENST00000451418 605 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.73□□□□□ -1.49
CCNA1P78396 AURKAPS2-201ENST00000454983 333 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 snoU13.1-201ENST00000459157 104 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.73□□□□□ -1.49
CCNA1P78396 AC093720.1-201ENST00000505681 714 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNA1P78396 RN7SKP276-201ENST00000516242 268 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNA1P78396 MORF4L1P3-201ENST00000525966 950 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNA1P78396 AC068790.7-201ENST00000602347 528 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC025857.2-201ENST00000602711 238 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AC104687.2-201ENST00000604442 342 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 AL161912.3-201ENST00000605404 628 ntBASIC5.73□□□□□ -1.49
CCNA1P78396 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNA1P78396 AL122125.1-201ENST00000616999 600 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms