Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 MIR4420-201ENST00000583944 77 ntBASIC8.55□□□□□ -1.04
SMARCA2P51531 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.55□□□□□ -1.04
SMARCA2P51531 AC093388.1-201ENST00000609166 430 ntBASIC8.55□□□□□ -1.04
SMARCA2P51531 AP000843.1-201ENST00000624880 701 ntBASIC8.55□□□□□ -1.04
SMARCA2P51531 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC8.55□□□□□ -1.04
SMARCA2P51531 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.55□□□□□ -1.04
SMARCA2P51531 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SMARCA2P51531 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SMARCA2P51531 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
SMARCA2P51531 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SMARCA2P51531 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
SMARCA2P51531 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.55□□□□□ -1.04
SMARCA2P51531 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.55□□□□□ -1.04
SMARCA2P51531 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.55□□□□□ -1.04
SMARCA2P51531 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.54□□□□□ -1.04
SMARCA2P51531 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.54□□□□□ -1.04
SMARCA2P51531 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.54□□□□□ -1.04
SMARCA2P51531 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
SMARCA2P51531 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
SMARCA2P51531 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 RPS12P10-201ENST00000427031 377 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 AC138761.5-201ENST00000433967 325 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 AC073358.1-201ENST00000505671 684 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 AC136777.2-201ENST00000522979 358 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.54□□□□□ -1.04
SMARCA2P51531 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC8.54□□□□□ -1.04
SMARCA2P51531 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.54□□□□□ -1.04
SMARCA2P51531 AL591034.3-201ENST00000605511 685 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 AC090948.2-201ENST00000607363 564 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 AL352984.2-202ENST00000613699 155 ntBASIC8.54□□□□□ -1.04
SMARCA2P51531 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SMARCA2P51531 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.54□□□□□ -1.04
SMARCA2P51531 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SMARCA2P51531 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SMARCA2P51531 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
SMARCA2P51531 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA2P51531 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.53□□□□□ -1.04
SMARCA2P51531 SNORA71.2-201ENST00000364941 134 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 RNU1-82P-201ENST00000390851 165 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA2P51531 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC004980.3-201ENST00000447046 365 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 AC021193.1-201ENST00000511607 420 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 AC092709.1-201ENST00000521355 1045 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8.53□□□□□ -1.04
SMARCA2P51531 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.53□□□□□ -1.04
SMARCA2P51531 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.53□□□□□ -1.04
SMARCA2P51531 STX3-208ENST00000641815 3236 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA2P51531 ACTR3BP2-202ENST00000623630 1338 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SMARCA2P51531 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
SMARCA2P51531 AC017104.4-201ENST00000636283 1592 ntBASIC8.53□□□□□ -1.04
SMARCA2P51531 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
SMARCA2P51531 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
SMARCA2P51531 RPL34P6-201ENST00000432390 345 ntBASIC8.52□□□□□ -1.04
SMARCA2P51531 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.52□□□□□ -1.04
SMARCA2P51531 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.52□□□□□ -1.04
SMARCA2P51531 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.52□□□□□ -1.04
SMARCA2P51531 AP005901.4-201ENST00000577336 569 ntBASIC8.52□□□□□ -1.04
SMARCA2P51531 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC8.52□□□□□ -1.04
SMARCA2P51531 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.52□□□□□ -1.04
SMARCA2P51531 MIR492-201ENST00000638676 116 ntBASIC8.52□□□□□ -1.04
SMARCA2P51531 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.52□□□□□ -1.04
SMARCA2P51531 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.52□□□□□ -1.05
SMARCA2P51531 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC8.52□□□□□ -1.05
SMARCA2P51531 ZNF137P-201ENST00000456718 1920 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 AL161912.2-201ENST00000565707 3007 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SMARCA2P51531 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.52□□□□□ -1.05
SMARCA2P51531 RN7SKP280-201ENST00000364196 304 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SMARCA2P51531 MIR670-201ENST00000390142 98 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 RPL23AP59-201ENST00000399415 461 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 SNORA11.1-201ENST00000408133 129 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 RNA5SP317-201ENST00000410176 116 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 RN7SKP17-201ENST00000411242 351 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 RNA5SP311-201ENST00000411290 116 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 RNA5SP315-201ENST00000516340 116 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 RNA5SP312-201ENST00000517068 116 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.52□□□□□ -1.05
SMARCA2P51531 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
SMARCA2P51531 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.52□□□□□ -1.05
SMARCA2P51531 AL121932.1-201ENST00000605542 214 ntBASIC8.52□□□□□ -1.05
SMARCA2P51531 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA2P51531 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA2P51531 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SMARCA2P51531 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms