Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFRAP16234 OR10D4P-201ENST00000525892 951 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFRAP16234 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC125612.1-201ENST00000547580 377 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFRAP16234 MIR3691-201ENST00000578066 90 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFRAP16234 BNIP3P35-201ENST00000604530 490 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AC073111.2-201ENST00000605657 1075 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDGFRAP16234 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 SCARNA15-201ENST00000607520 4325 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 OR9K1P-202ENST00000641111 3217 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDGFRAP16234 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.41□□□□□ -1.54
PDGFRAP16234 OR5T3-201ENST00000303059 1023 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 MIR105-2-201ENST00000385083 81 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 VDAC2P1-201ENST00000399358 958 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFRAP16234 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC005033.1-201ENST00000428904 813 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC114878.1-201ENST00000441166 358 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 Z99127.2-201ENST00000441426 334 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AL389915.2-201ENST00000454576 441 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC009127.1-201ENST00000467090 155 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC104629.2-201ENST00000468627 598 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC020779.1-201ENST00000478757 796 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 LARP7P4-201ENST00000481075 878 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 PCNAP1-201ENST00000505363 709 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC097173.1-201ENST00000505862 819 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFRAP16234 RFPL4AP5-201ENST00000514977 504 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PDGFRAP16234 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC018442.3-201ENST00000523025 183 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFRAP16234 OR4V1P-201ENST00000525394 1140 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC024940.3-201ENST00000538551 316 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC074029.2-201ENST00000551045 634 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC092868.3-201ENST00000560515 784 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC044860.2-201ENST00000561005 179 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC040958.1-201ENST00000561102 201 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC095055.1-201ENST00000603472 1113 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 AC012467.1-201ENST00000607740 256 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AC211433.2-201ENST00000608433 387 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 AL121612.2-201ENST00000612261 482 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFRAP16234 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFRAP16234 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PDGFRAP16234 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDGFRAP16234 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.41□□□□□ -1.54
PDGFRAP16234 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PDGFRAP16234 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFRAP16234 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PDGFRAP16234 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFRAP16234 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFRAP16234 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PDGFRAP16234 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDGFRAP16234 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFRAP16234 U8.4-201ENST00000363626 134 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 RNA5SP187-201ENST00000384400 119 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 AL390316.1-201ENST00000406279 553 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 MTND3P20-201ENST00000407663 186 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 RN7SKP126-201ENST00000411143 300 ntBASIC5.4□□□□□ -1.54
PDGFRAP16234 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms