Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.12□□□□□ -1.11
CFTRP13569 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.12□□□□□ -1.11
CFTRP13569 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.12□□□□□ -1.11
CFTRP13569 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 AL451062.2-201ENST00000427515 271 ntBASIC8.12□□□□□ -1.11
CFTRP13569 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.12□□□□□ -1.11
CFTRP13569 AC010476.1-201ENST00000519111 851 ntBASIC8.12□□□□□ -1.11
CFTRP13569 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.12□□□□□ -1.11
CFTRP13569 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC8.12□□□□□ -1.11
CFTRP13569 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.12□□□□□ -1.11
CFTRP13569 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.12□□□□□ -1.11
CFTRP13569 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CFTRP13569 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CFTRP13569 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC8.12□□□□□ -1.11
CFTRP13569 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.11□□□□□ -1.11
CFTRP13569 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC8.11□□□□□ -1.11
CFTRP13569 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.11□□□□□ -1.11
CFTRP13569 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC8.11□□□□□ -1.11
CFTRP13569 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.11□□□□□ -1.11
CFTRP13569 RNA5SP366-201ENST00000365454 123 ntBASIC8.11□□□□□ -1.11
CFTRP13569 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 NRBF2P2-201ENST00000413087 861 ntBASIC8.11□□□□□ -1.11
CFTRP13569 TMSB10P2-201ENST00000416049 131 ntBASIC8.11□□□□□ -1.11
CFTRP13569 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.11□□□□□ -1.11
CFTRP13569 AC025164.1-201ENST00000496249 478 ntBASIC8.11□□□□□ -1.11
CFTRP13569 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC8.11□□□□□ -1.11
CFTRP13569 MIR2116-201ENST00000517221 80 ntBASIC8.11□□□□□ -1.11
CFTRP13569 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 TRAV8-5-201ENST00000537369 341 ntBASIC8.11□□□□□ -1.11
CFTRP13569 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.11□□□□□ -1.11
CFTRP13569 AC022916.3-201ENST00000592961 742 ntBASIC8.11□□□□□ -1.11
CFTRP13569 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CFTRP13569 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.11□□□□□ -1.11
CFTRP13569 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CFTRP13569 AL731532.1-201ENST00000623972 4236 ntBASIC8.1□□□□□ -1.11
CFTRP13569 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.1□□□□□ -1.11
CFTRP13569 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC8.1□□□□□ -1.11
CFTRP13569 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CFTRP13569 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
CFTRP13569 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 RPS26P8-201ENST00000393490 348 ntBASIC8.1□□□□□ -1.11
CFTRP13569 AL022722.2-201ENST00000402519 180 ntBASIC8.1□□□□□ -1.11
CFTRP13569 GPS2P1-201ENST00000411761 986 ntBASIC8.1□□□□□ -1.11
CFTRP13569 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.1□□□□□ -1.11
CFTRP13569 RPL12P9-201ENST00000412942 488 ntBASIC8.1□□□□□ -1.11
CFTRP13569 QRSL1P2-201ENST00000418582 964 ntBASIC8.1□□□□□ -1.11
CFTRP13569 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.1□□□□□ -1.11
CFTRP13569 RPL23AP93-201ENST00000440847 484 ntBASIC8.1□□□□□ -1.11
CFTRP13569 HSFY6P-201ENST00000445573 403 ntBASIC8.1□□□□□ -1.11
CFTRP13569 H2AFZP5-201ENST00000446960 382 ntBASIC8.1□□□□□ -1.11
CFTRP13569 PYM1-205ENST00000547925 499 ntTSL 3 BASIC8.1□□□□□ -1.11
CFTRP13569 SNORA74C-1-201ENST00000580726 201 ntBASIC8.1□□□□□ -1.11
CFTRP13569 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.1□□□□□ -1.11
CFTRP13569 ARF4P1-201ENST00000605447 541 ntBASIC8.1□□□□□ -1.11
CFTRP13569 AC093388.1-201ENST00000609166 430 ntBASIC8.1□□□□□ -1.11
CFTRP13569 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC8.1□□□□□ -1.11
CFTRP13569 AC000095.2-202ENST00000637415 154 ntBASIC8.1□□□□□ -1.11
CFTRP13569 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC8.1□□□□□ -1.11
CFTRP13569 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CFTRP13569 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CFTRP13569 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CFTRP13569 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFTRP13569 AL590762.2-201ENST00000395798 571 ntBASIC8.09□□□□□ -1.11
CFTRP13569 ARL4AP5-201ENST00000404372 599 ntBASIC8.09□□□□□ -1.11
CFTRP13569 LINC01881-201ENST00000416103 412 ntBASIC8.09□□□□□ -1.11
CFTRP13569 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC8.09□□□□□ -1.11
CFTRP13569 MRPL35P2-201ENST00000448009 511 ntBASIC8.09□□□□□ -1.11
CFTRP13569 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC8.09□□□□□ -1.11
CFTRP13569 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 UQCRHP4-201ENST00000471686 272 ntBASIC8.09□□□□□ -1.11
CFTRP13569 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 AC023043.4-201ENST00000612081 449 ntBASIC8.09□□□□□ -1.11
CFTRP13569 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFTRP13569 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFTRP13569 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.09□□□□□ -1.11
CFTRP13569 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFTRP13569 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CFTRP13569 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFTRP13569 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms