Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.95□□□□□ -1.78
CD28P10747 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 AC123912.3-201ENST00000600907 1367 ntBASIC3.95□□□□□ -1.78
CD28P10747 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD28P10747 RN7SKP113-201ENST00000363891 295 ntBASIC3.95□□□□□ -1.78
CD28P10747 AC136624.1-201ENST00000400791 413 ntBASIC3.95□□□□□ -1.78
CD28P10747 AL807761.1-201ENST00000417622 171 ntBASIC3.95□□□□□ -1.78
CD28P10747 HYALP1-201ENST00000417674 1279 ntBASIC3.95□□□□□ -1.78
CD28P10747 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 HSPD1P12-201ENST00000429127 1069 ntBASIC3.95□□□□□ -1.78
CD28P10747 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 TAAR4P-201ENST00000454843 1039 ntBASIC3.95□□□□□ -1.78
CD28P10747 RPS29P33-201ENST00000456717 146 ntBASIC3.95□□□□□ -1.78
CD28P10747 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 AC063943.1-201ENST00000465434 453 ntBASIC3.95□□□□□ -1.78
CD28P10747 RN7SL738P-201ENST00000470264 297 ntBASIC3.95□□□□□ -1.78
CD28P10747 AC008897.1-201ENST00000494006 347 ntBASIC3.95□□□□□ -1.78
CD28P10747 RPS24P16-201ENST00000497294 392 ntBASIC3.95□□□□□ -1.78
CD28P10747 MORF4L2P1-201ENST00000503761 858 ntBASIC3.95□□□□□ -1.78
CD28P10747 AC097173.1-201ENST00000505862 819 ntBASIC3.95□□□□□ -1.78
CD28P10747 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.95□□□□□ -1.78
CD28P10747 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 BNIP3P1-201ENST00000547295 580 ntBASIC3.95□□□□□ -1.78
CD28P10747 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 MIR4660-201ENST00000583549 74 ntBASIC3.95□□□□□ -1.78
CD28P10747 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.95□□□□□ -1.78
CD28P10747 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.95□□□□□ -1.78
CD28P10747 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 FRG1EP-201ENST00000634469 770 ntBASIC3.95□□□□□ -1.78
CD28P10747 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CD28P10747 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD28P10747 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.95□□□□□ -1.78
CD28P10747 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CD28P10747 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.94□□□□□ -1.78
CD28P10747 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 RNA5SP87-201ENST00000384155 118 ntBASIC3.94□□□□□ -1.78
CD28P10747 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.94□□□□□ -1.78
CD28P10747 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.94□□□□□ -1.78
CD28P10747 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.94□□□□□ -1.78
CD28P10747 AL121578.1-201ENST00000428051 892 ntBASIC3.94□□□□□ -1.78
CD28P10747 BX323845.1-201ENST00000432417 179 ntBASIC3.94□□□□□ -1.78
CD28P10747 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.94□□□□□ -1.78
CD28P10747 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.94□□□□□ -1.78
CD28P10747 AL354714.3-201ENST00000447284 493 ntBASIC3.94□□□□□ -1.78
CD28P10747 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.94□□□□□ -1.78
CD28P10747 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.94□□□□□ -1.78
CD28P10747 RN7SL860P-201ENST00000473738 223 ntBASIC3.94□□□□□ -1.78
CD28P10747 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 AC091544.1-201ENST00000484702 348 ntBASIC3.94□□□□□ -1.78
CD28P10747 RPS12P31-201ENST00000491419 398 ntBASIC3.94□□□□□ -1.78
CD28P10747 AL049874.2-201ENST00000492636 288 ntBASIC3.94□□□□□ -1.78
CD28P10747 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD28P10747 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.94□□□□□ -1.78
CD28P10747 AC021193.1-201ENST00000511607 420 ntBASIC3.94□□□□□ -1.78
CD28P10747 RNA5SP230-201ENST00000517039 122 ntBASIC3.94□□□□□ -1.78
CD28P10747 GCSHP4-201ENST00000538792 439 ntBASIC3.94□□□□□ -1.78
CD28P10747 AC079075.1-201ENST00000559543 878 ntBASIC3.94□□□□□ -1.78
CD28P10747 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.94□□□□□ -1.78
CD28P10747 RN7SL290P-201ENST00000578661 300 ntBASIC3.94□□□□□ -1.78
CD28P10747 MIR4270-201ENST00000581799 70 ntBASIC3.94□□□□□ -1.78
CD28P10747 ELOCP28-201ENST00000590044 317 ntBASIC3.94□□□□□ -1.78
CD28P10747 AC087468.1-201ENST00000604365 630 ntBASIC3.94□□□□□ -1.78
CD28P10747 AP005432.2-201ENST00000608162 586 ntBASIC3.94□□□□□ -1.78
CD28P10747 AL161616.1-201ENST00000611867 286 ntBASIC3.94□□□□□ -1.78
CD28P10747 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.94□□□□□ -1.78
CD28P10747 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.94□□□□□ -1.78
CD28P10747 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms