Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
MMP3P08254 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 Z97832.1-201ENST00000402490 328 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 AL590139.1-201ENST00000416267 400 ntBASIC5.69□□□□□ -1.5
MMP3P08254 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 NPM1P26-201ENST00000426339 738 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 HSPD1P12-201ENST00000429127 1069 ntBASIC5.69□□□□□ -1.5
MMP3P08254 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 AC090018.1-201ENST00000434369 367 ntBASIC5.69□□□□□ -1.5
MMP3P08254 RPL7P11-201ENST00000437586 658 ntBASIC5.69□□□□□ -1.5
MMP3P08254 OR7E125P-201ENST00000443450 846 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 AC063943.1-201ENST00000465434 453 ntBASIC5.69□□□□□ -1.5
MMP3P08254 RN7SL738P-201ENST00000470264 297 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC135999.1-201ENST00000478962 479 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC012123.2-201ENST00000485809 248 ntBASIC5.69□□□□□ -1.5
MMP3P08254 RPS12P31-201ENST00000491419 398 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC090543.1-201ENST00000492168 485 ntBASIC5.69□□□□□ -1.5
MMP3P08254 PCNAP1-201ENST00000505363 709 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 AC111000.6-201ENST00000514471 709 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.69□□□□□ -1.5
MMP3P08254 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 AC079075.1-201ENST00000559543 878 ntBASIC5.69□□□□□ -1.5
MMP3P08254 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 DNAJC19P3-201ENST00000594491 331 ntBASIC5.69□□□□□ -1.5
MMP3P08254 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 AC242628.1-201ENST00000606810 391 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AL356608.1-201ENST00000610034 820 ntBASIC5.69□□□□□ -1.5
MMP3P08254 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.69□□□□□ -1.5
MMP3P08254 AL731566.2-201ENST00000618971 317 ntBASIC5.69□□□□□ -1.5
MMP3P08254 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 AC000095.2-202ENST00000637415 154 ntBASIC5.69□□□□□ -1.5
MMP3P08254 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.69□□□□□ -1.5
MMP3P08254 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 AC004158.1-201ENST00000564508 4319 ntBASIC5.69□□□□□ -1.5
MMP3P08254 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
MMP3P08254 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MMP3P08254 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 AL355488.2-201ENST00000609909 2850 ntBASIC5.68□□□□□ -1.5
MMP3P08254 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MMP3P08254 RN7SKP113-201ENST00000363891 295 ntBASIC5.68□□□□□ -1.5
MMP3P08254 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 FABP12P1-201ENST00000401911 322 ntBASIC5.68□□□□□ -1.5
MMP3P08254 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP3P08254 IGHV5-78-201ENST00000450948 295 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 MTND6P32-201ENST00000457611 483 ntBASIC5.68□□□□□ -1.5
MMP3P08254 RN7SL443P-201ENST00000464331 290 ntBASIC5.68□□□□□ -1.5
MMP3P08254 RN7SL319P-201ENST00000480656 221 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AC092902.1-201ENST00000486999 259 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AC008897.1-201ENST00000494006 347 ntBASIC5.68□□□□□ -1.5
MMP3P08254 MRPS33P2-201ENST00000507850 322 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP3P08254 SEPT10P1-201ENST00000517342 1162 ntBASIC5.68□□□□□ -1.5
MMP3P08254 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 NPM1P52-201ENST00000518264 846 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.68□□□□□ -1.5
MMP3P08254 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.68□□□□□ -1.5
MMP3P08254 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.68□□□□□ -1.5
MMP3P08254 UBE2FP2-201ENST00000566646 462 ntBASIC5.68□□□□□ -1.5
MMP3P08254 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.68□□□□□ -1.5
MMP3P08254 MIR7853-201ENST00000584820 132 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 AF230666.2-201ENST00000602328 725 ntBASIC5.68□□□□□ -1.5
MMP3P08254 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.68□□□□□ -1.5
MMP3P08254 AL161616.1-201ENST00000611867 286 ntBASIC5.68□□□□□ -1.5
MMP3P08254 MIR6133-201ENST00000617057 108 ntBASIC5.68□□□□□ -1.5
MMP3P08254 AC022306.3-201ENST00000619930 550 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms