Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNOT4O95628 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNOT4O95628 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNOT4O95628 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNOT4O95628 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNOT4O95628 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNOT4O95628 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 CLCA3P-203ENST00000490028 2781 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNOT4O95628 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNOT4O95628 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNOT4O95628 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 U3.52-201ENST00000384034 216 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 OR8G2P-201ENST00000412796 908 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 PGBD4P8-201ENST00000412993 562 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC003989.1-201ENST00000434569 565 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.79□□□□□ -1.48
CNOT4O95628 PMS2P9-201ENST00000441237 515 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AL591503.2-201ENST00000442314 1005 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 CDC27P1-201ENST00000445384 715 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AL133351.3-201ENST00000454998 193 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.79□□□□□ -1.48
CNOT4O95628 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC021006.1-201ENST00000489849 553 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 RPL19P11-201ENST00000495944 589 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 H3F3AP3-201ENST00000497682 407 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 MTATP6P22-201ENST00000507369 598 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC109458.1-201ENST00000508858 316 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC108471.1-201ENST00000513977 287 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 SNORA31.13-201ENST00000516624 135 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC013701.1-201ENST00000522657 465 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 AP002963.1-201ENST00000530590 184 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 OR8G3P-201ENST00000533406 921 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC023968.1-201ENST00000560719 475 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC026826.3-201ENST00000561747 158 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC136619.2-201ENST00000563361 631 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC027104.1-201ENST00000563702 681 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNOT4O95628 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC087683.1-201ENST00000591187 441 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC006539.2-201ENST00000601729 572 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AL683813.2-201ENST00000605245 502 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AC090525.3-201ENST00000605601 189 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 SNORA74.4-201ENST00000607595 199 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AF250324.2-201ENST00000608299 610 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AL354718.1-201ENST00000619764 589 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AP001005.3-201ENST00000622049 129 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC111152.1-202ENST00000635848 339 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC073429.2-201ENST00000569694 1444 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 AF287957.1-201ENST00000607368 1595 ntBASIC5.79□□□□□ -1.48
CNOT4O95628 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.79□□□□□ -1.48
CNOT4O95628 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.79□□□□□ -1.48
CNOT4O95628 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNOT4O95628 AL139384.2-201ENST00000613809 3590 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms