Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GPC4O75487 AP000542.2-201ENST00000623199 6179 ntBASIC5.3□□□□□ -1.56
GPC4O75487 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 MIR133B-201ENST00000362210 119 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNU1-19P-201ENST00000363306 165 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNA5SP335-201ENST00000363817 110 ntBASIC5.3□□□□□ -1.56
GPC4O75487 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GPC4O75487 RNU6-1320P-201ENST00000390838 107 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNU6-1269P-201ENST00000391139 107 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
GPC4O75487 RN7SKP206-201ENST00000410823 293 ntBASIC5.3□□□□□ -1.56
GPC4O75487 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC4O75487 NPM1P22-201ENST00000427761 952 ntBASIC5.3□□□□□ -1.56
GPC4O75487 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC4O75487 UBE2V1P6-201ENST00000430840 422 ntBASIC5.3□□□□□ -1.56
GPC4O75487 GSTM5P1-201ENST00000434751 660 ntBASIC5.3□□□□□ -1.56
GPC4O75487 ELOCP3-201ENST00000439303 348 ntBASIC5.3□□□□□ -1.56
GPC4O75487 GAPDHP25-201ENST00000447061 1001 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC090804.1-201ENST00000448870 490 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RPL7P45-201ENST00000455851 743 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNU6-599P-201ENST00000459383 107 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNU6-1193P-201ENST00000459461 107 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC092691.2-201ENST00000461787 803 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RN7SL547P-201ENST00000490793 290 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNA5SP362-201ENST00000516048 118 ntBASIC5.3□□□□□ -1.56
GPC4O75487 MTCYBP19-201ENST00000517463 1124 ntBASIC5.3□□□□□ -1.56
GPC4O75487 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.3□□□□□ -1.56
GPC4O75487 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC4O75487 AC109635.6-201ENST00000525487 1113 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC004923.2-201ENST00000529649 369 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AP004607.2-201ENST00000533949 322 ntBASIC5.3□□□□□ -1.56
GPC4O75487 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.3□□□□□ -1.56
GPC4O75487 AC087888.1-201ENST00000550884 1254 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC106730.2-201ENST00000566641 540 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC233266.2-201ENST00000567067 528 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RN7SL356P-201ENST00000582228 248 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC068020.1-201ENST00000594215 661 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC011445.2-201ENST00000599274 173 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AC130352.1-201ENST00000602979 661 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AL096803.3-201ENST00000609032 532 ntBASIC5.3□□□□□ -1.56
GPC4O75487 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 RNU6-368P-201ENST00000620928 107 ntBASIC5.3□□□□□ -1.56
GPC4O75487 RNU6-538P-201ENST00000622329 107 ntBASIC5.3□□□□□ -1.56
GPC4O75487 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC4O75487 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.3□□□□□ -1.56
GPC4O75487 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
GPC4O75487 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GPC4O75487 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.3□□□□□ -1.56
GPC4O75487 AC132825.1-201ENST00000463573 2247 ntBASIC5.29□□□□□ -1.56
GPC4O75487 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 AC092642.1-201ENST00000392417 425 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AL133388.1-201ENST00000404509 287 ntBASIC5.29□□□□□ -1.56
GPC4O75487 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC4O75487 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC4O75487 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 NDUFA5P10-201ENST00000432147 357 ntBASIC5.29□□□□□ -1.56
GPC4O75487 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.29□□□□□ -1.56
GPC4O75487 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 TCEA1P3-201ENST00000443005 880 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC4O75487 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC4O75487 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.29□□□□□ -1.56
GPC4O75487 CALM1P2-201ENST00000452941 448 ntBASIC5.29□□□□□ -1.56
GPC4O75487 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC4O75487 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
GPC4O75487 AC092754.1-201ENST00000472975 479 ntBASIC5.29□□□□□ -1.56
GPC4O75487 COX6B1P2-201ENST00000489624 230 ntBASIC5.29□□□□□ -1.56
GPC4O75487 RPL23AP73-201ENST00000492507 471 ntBASIC5.29□□□□□ -1.56
GPC4O75487 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC4O75487 AL671862.1-201ENST00000515851 349 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC4O75487 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 AC106785.3-201ENST00000564064 847 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AC079148.1-201ENST00000565944 819 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC4O75487 AC016542.1-201ENST00000608259 493 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AC244107.2-201ENST00000611773 76 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AC006213.4-201ENST00000616184 634 ntBASIC5.29□□□□□ -1.56
GPC4O75487 MIR1264-201ENST00000616374 69 ntBASIC5.29□□□□□ -1.56
GPC4O75487 AL645927.2-201ENST00000618350 349 ntBASIC5.29□□□□□ -1.56
GPC4O75487 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
GPC4O75487 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC4O75487 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC4O75487 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms