Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL021331.1-201ENST00000402817 582 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL357752.1-201ENST00000412817 349 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 BX284632.2-201ENST00000421091 399 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL512605.1-202ENST00000441919 381 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL359955.2-201ENST00000445380 353 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 PPIAP20-201ENST00000449839 135 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 HLA-DPA3-207ENST00000454398 229 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 TPTE2P5-203ENST00000458118 728 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 MTND2P14-201ENST00000482139 351 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 DUTP1-201ENST00000493631 470 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 RN7SL284P-201ENST00000498823 275 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 SNORA3.4-201ENST00000515969 96 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 MTCO1P47-201ENST00000523889 1271 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 MTCO2P15-201ENST00000532655 656 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL356057.1-201ENST00000533798 831 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC091078.2-201ENST00000557145 559 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL035411.2-201ENST00000604022 421 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 MIR6793-201ENST00000612376 63 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC026124.2-201ENST00000621847 656 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC129778.1-202ENST00000623812 261 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AL591379.1-207ENST00000635982 261 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.82□□□□□ -1.48
CCDC78A2IDD5 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC78A2IDD5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 CASC19-260ENST00000641828 2001 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 RNA5SP435-201ENST00000364044 108 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 RNA5SP500-201ENST00000364486 119 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AL391422.1-201ENST00000402155 436 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 NPM1P37-201ENST00000403105 874 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 RPL7P27-201ENST00000403775 720 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AC016739.1-201ENST00000405359 345 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 FCF1P5-201ENST00000406490 482 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AC090960.1-201ENST00000421072 306 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AL513175.2-201ENST00000422071 443 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 HMGB3P10-201ENST00000434734 572 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 PTGES3P5-201ENST00000455109 434 ntBASIC5.81□□□□□ -1.48
CCDC78A2IDD5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC78A2IDD5 ACA64.1-201ENST00000459171 127 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms