Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC005261.2-201ENST00000593427 4258 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 OR11H5P-202ENST00000641612 1325 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 U3.1-201ENST00000362500 215 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009413.1-201ENST00000414823 399 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AL354751.2-201ENST00000415471 210 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC008753.1-201ENST00000423096 284 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RPS24P8-201ENST00000431490 402 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 TCEAL4P1-201ENST00000453620 588 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 MTCO1P42-201ENST00000457379 726 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SL213P-201ENST00000463482 317 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SL251P-201ENST00000464175 297 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL36AP51-201ENST00000487216 318 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC013356.1-201ENST00000489027 564 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL39P36-201ENST00000490784 156 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC025674.1-201ENST00000507074 324 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC006390.1-201ENST00000508068 283 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC008496.1-201ENST00000509131 295 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC027801.3-201ENST00000515049 698 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 Y_RNA.672-201ENST00000516289 104 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC037471.2-201ENST00000564941 598 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 HMGN1P30-201ENST00000589286 268 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AL031429.2-201ENST00000602605 649 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC007621.1-201ENST00000604544 437 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 RPS28P1-201ENST00000604589 187 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AL121985.2-201ENST00000621192 555 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AL158801.5-201ENST00000623123 465 ntBASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PCDHGA11Q9Y5H2 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 SNORA73B-201ENST00000363217 204 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 Y_RNA.431-201ENST00000384086 102 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 RPS21P8-201ENST00000413365 247 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 EIF1P3-201ENST00000423841 334 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 OR52B5P-201ENST00000435337 951 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AL731892.1-201ENST00000437364 1192 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 OR3B1P-201ENST00000437536 893 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC140076.1-201ENST00000449897 361 ntBASIC7.05□□□□□ -1.28
PCDHGA11Q9Y5H2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms