Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC007204.2-201ENST00000615022 616 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC021755.4-201ENST00000616620 456 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AL355974.3-201ENST00000617383 467 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 MIR6837-201ENST00000620884 64 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC027228.2-201ENST00000567141 2154 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC022164.1-201ENST00000568767 2673 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 U3.7-201ENST00000363668 216 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC009804.1-201ENST00000400949 179 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 TXNL1P1-201ENST00000429528 554 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 RNFT1P2-201ENST00000443064 757 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 Z73417.1-201ENST00000447373 778 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 TPT1P1-201ENST00000458495 518 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 EIF1P7-201ENST00000487533 337 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 TRBV5-2-201ENST00000489095 273 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC073610.1-201ENST00000489971 396 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 HMGB1P38-201ENST00000490557 577 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 DUTP1-201ENST00000493631 470 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 RNA5SP34-201ENST00000516887 130 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AL121594.2-201ENST00000541658 472 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 OSBPL9P5-201ENST00000542581 171 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 MTND3P13-201ENST00000574391 343 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 PCNAP1-202ENST00000595299 752 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC010245.2-201ENST00000606908 1167 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AL159169.2-201ENST00000610061 1269 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC091304.6-201ENST00000619761 202 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC006840.1-201ENST00000623069 542 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC078883.4-201ENST00000623218 367 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC093875.1-201ENST00000623688 504 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC132068.1-201ENST00000623805 459 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 SAMMSON-209ENST00000641222 1100 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC093849.1-201ENST00000563631 2209 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC011504.1-201ENST00000623331 4103 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 AC005725.1-201ENST00000577346 2607 ntBASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
CTDP1Q9Y5B0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC093775.1-201ENST00000624154 1868 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 RNA5SP30-201ENST00000365552 115 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 BX664727.1-201ENST00000416024 466 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 MTCO1P53-201ENST00000441633 699 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 RPL31P20-201ENST00000449593 360 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC008379.1-201ENST00000463655 464 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 NDUFA5P9-201ENST00000472609 340 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 RN7SL583P-201ENST00000475692 287 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 SETP6-201ENST00000479329 568 ntBASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.54□□□□□ -1.36
CTDP1Q9Y5B0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms