Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RNU6-368P-201ENST00000620928 107 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 RNU6-538P-201ENST00000622329 107 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC007342.9-201ENST00000623877 1385 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF6Q9Y252 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC131971.1-201ENST00000332881 1482 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AC133552.1-201ENST00000569988 4007 ntBASIC4.88□□□□□ -1.63
RNF6Q9Y252 AL353796.1-201ENST00000561542 3241 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AL022322.2-201ENST00000624072 20397 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC103591.2-201ENST00000265259 766 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 MIR365B-201ENST00000362317 111 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 RNU4-23P-201ENST00000362839 140 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 RNU1-43P-201ENST00000365052 165 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AL078599.1-201ENST00000402075 293 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AL589647.1-201ENST00000402485 466 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC097523.2-201ENST00000435551 652 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AL138787.1-202ENST00000437804 898 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AL772161.1-201ENST00000439130 476 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 NOP56P2-201ENST00000447491 769 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 HMGB1P40-201ENST00000525121 540 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 SNORD39.2-201ENST00000579995 76 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC009027.1-201ENST00000604510 479 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC009163.6-201ENST00000612367 342 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC109583.2-201ENST00000617367 129 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC015722.2-201ENST00000622210 551 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AP000648.2-201ENST00000624182 404 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 AC074101.1-201ENST00000637861 241 ntBASIC4.87□□□□□ -1.63
RNF6Q9Y252 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF6Q9Y252 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF6Q9Y252 OR10AB1P-202ENST00000641219 1686 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF6Q9Y252 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF6Q9Y252 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF6Q9Y252 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF6Q9Y252 SNORA16A-201ENST00000384342 137 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RNU1-106P-201ENST00000384382 164 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AC240504.1-201ENST00000395709 845 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AL359643.1-201ENST00000404109 423 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AL133388.1-201ENST00000404509 287 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 MIR1271-201ENST00000408537 86 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RN7SKP97-201ENST00000410966 333 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RN7SKP216-201ENST00000411050 312 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 OR2AH1P-201ENST00000425717 928 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 VN1R54P-201ENST00000435210 1049 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 RPL7P61-201ENST00000451721 751 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AL389915.2-201ENST00000454576 441 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AC091685.2-201ENST00000454924 864 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AL356390.1-201ENST00000455684 397 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 AC092754.1-201ENST00000472975 479 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RPL7P41-201ENST00000485823 957 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 AC022133.1-201ENST00000490961 571 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 NDUFB5P1-201ENST00000508134 564 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RNU6-319P-201ENST00000516025 108 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RNU6-941P-201ENST00000516346 108 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 SCARNA16.4-201ENST00000516956 187 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF6Q9Y252 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF6Q9Y252 MIR4646-201ENST00000580775 63 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 RN7SL356P-201ENST00000582228 248 ntBASIC4.86□□□□□ -1.63
RNF6Q9Y252 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms