Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 MIPEPP2-201ENST00000422560 1819 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC000374.1-201ENST00000434698 1745 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC123912.3-201ENST00000600907 1367 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC007996.1-201ENST00000620414 2821 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 RN7SKP95-201ENST00000362860 303 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 RN7SKP103-201ENST00000363848 320 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 RNA5SP428-201ENST00000365129 132 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AL353625.1-202ENST00000366273 571 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC007068.1-201ENST00000396690 844 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC244033.1-201ENST00000426826 870 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 BX323845.1-201ENST00000432417 179 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AL772161.1-201ENST00000439130 476 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 RPL31P44-201ENST00000447680 377 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 BRD9P1-201ENST00000529855 560 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC008033.2-201ENST00000542626 177 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AP005262.1-201ENST00000582646 997 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC011487.3-201ENST00000593607 453 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 OR8G7P-201ENST00000616658 848 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC074140.1-201ENST00000621617 208 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 IRF5P1-201ENST00000504852 2164 ntBASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CLIP2Q9UDT6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CLIP2Q9UDT6 SMG1P4-204ENST00000523028 4131 ntBASIC5.96□□□□□ -1.45
CLIP2Q9UDT6 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.96□□□□□ -1.45
CLIP2Q9UDT6 CASC19-221ENST00000641309 1382 ntBASIC5.96□□□□□ -1.45
CLIP2Q9UDT6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC017079.1-201ENST00000333650 415 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 SNORA66-201ENST00000384792 133 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AL139128.1-201ENST00000413921 941 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 CHEK2P3-201ENST00000416118 248 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 OR2AM1P-201ENST00000422137 422 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC104333.2-201ENST00000422630 192 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC104837.2-201ENST00000427236 424 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 NPM1P48-201ENST00000436002 853 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 CYCSP24-201ENST00000445119 316 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC091685.2-201ENST00000454924 864 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 RPS3AP41-201ENST00000462701 778 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC010350.1-201ENST00000504908 231 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 RN7SKP5-201ENST00000517045 272 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC008126.1-201ENST00000549019 480 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC087783.2-201ENST00000605070 562 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC100827.5-201ENST00000615883 426 ntBASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLIP2Q9UDT6 AC008079.2-201ENST00000623543 20396 ntBASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.95□□□□□ -1.46
CLIP2Q9UDT6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms