Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 ZNF876P-202ENST00000398732 1485 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC027088.4-201ENST00000611559 1947 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 U3.10-201ENST00000364459 214 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 RN7SKP78-201ENST00000364711 318 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 SNORA5.1-201ENST00000384275 131 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 SNORD116-12-201ENST00000384468 92 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC004386.1-201ENST00000393214 761 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL354890.1-201ENST00000413730 346 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 METTL15P3-201ENST00000415522 1221 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 RPS3AP37-201ENST00000419176 745 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 USP9YP11-201ENST00000427537 717 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 VN1R110P-201ENST00000438988 971 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL138899.2-201ENST00000439139 499 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC073052.1-201ENST00000440417 714 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 EIF5AP4-201ENST00000441206 465 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC023141.8-201ENST00000442554 208 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 TRY2P-201ENST00000448860 689 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 RPL7P45-201ENST00000455851 743 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL122020.1-201ENST00000472287 459 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 BET1P1-201ENST00000482276 359 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL356057.1-201ENST00000533798 831 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PIGPP4-201ENST00000584447 307 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC006272.2-201ENST00000594725 163 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 MTCO2P22-201ENST00000603246 681 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC108865.2-201ENST00000606881 432 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC108673.3-201ENST00000609183 335 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AL139407.1-201ENST00000613826 1175 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AP002782.1-201ENST00000623107 614 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.53□□□□□ -1.52
EHD3Q9NZN3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.53□□□□□ -1.52
EHD3Q9NZN3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC133552.1-201ENST00000569988 4007 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC114774.1-201ENST00000507410 1770 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC117409.1-201ENST00000470499 1310 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 RNU1-146P-201ENST00000364015 165 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 MIR621-201ENST00000384919 96 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC092638.1-201ENST00000411966 1275 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 CDY17P-201ENST00000414121 1282 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 LUZP4P1-201ENST00000415420 344 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 CDY8P-201ENST00000428380 1279 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 DEFA9P-201ENST00000433042 285 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 CDY20P-201ENST00000447528 1279 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AC004129.2-201ENST00000457229 287 ntBASIC5.52□□□□□ -1.53
EHD3Q9NZN3 AL157777.1-201ENST00000468100 304 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms