Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL359091.1-201ENST00000449048 1734 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 WDR95P-201ENST00000425638 1542 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 BIN2P1-201ENST00000504996 1530 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 HSPD1P8-201ENST00000400121 1658 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNU1-49P-201ENST00000363468 159 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNA5SP346-201ENST00000363541 121 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNU6-413P-201ENST00000384115 107 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 SNORA40.2-201ENST00000390847 128 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 SNORA26.8-201ENST00000391306 124 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 HMGB1P10-201ENST00000395823 563 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AK4P4-201ENST00000419465 646 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC006960.1-201ENST00000419980 153 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 GTF2IP7-202ENST00000436677 309 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 OR3D1P-201ENST00000438288 955 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL357520.1-201ENST00000441557 453 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC016908.1-201ENST00000442571 1219 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL022237.1-201ENST00000446663 358 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 MTCYBP1-201ENST00000454315 1119 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC118758.1-202ENST00000454719 225 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RPL7P32-201ENST00000457119 744 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL117692.1-201ENST00000494283 713 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC112484.3-201ENST00000505910 329 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNA5SP206-201ENST00000516703 121 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNA5SP441-201ENST00000516809 88 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 MTCYBP19-201ENST00000517463 1124 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 NBEAP1-201ENST00000554452 979 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC011260.1-201ENST00000578420 472 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC022146.1-201ENST00000595307 847 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL353621.2-201ENST00000605340 133 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RPSAP75-201ENST00000605848 301 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC080013.4-201ENST00000607624 649 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC009779.8-202ENST00000607990 932 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC105227.2-201ENST00000615075 605 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 uc_338.31-201ENST00000615595 186 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 U6atac.1-201ENST00000616025 117 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC139769.3-201ENST00000618383 175 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL133370.2-201ENST00000619934 439 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC009878.1-201ENST00000621819 340 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AL161912.4-201ENST00000623889 2468 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC024651.2-201ENST00000562480 2098 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 PPBPP2-201ENST00000513150 1362 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 AC020633.1-201ENST00000468439 2247 ntBASIC5.54□□□□□ -1.52
PARPBPQ9NWS1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 ZNF833P-201ENST00000424938 1494 ntBASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 AC079298.1-201ENST00000625026 1619 ntBASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PARPBPQ9NWS1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms