Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RPL7AP61-201ENST00000443410 636 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 MRPL48P1-201ENST00000445390 636 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 GAPDHP25-201ENST00000447061 1001 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC091180.1-201ENST00000462104 372 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 RN7SL174P-201ENST00000475578 289 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 RN7SL547P-201ENST00000490793 290 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AP004607.2-201ENST00000533949 322 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AP002373.2-201ENST00000541631 1060 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 BLZF2P-201ENST00000553776 1130 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AL049830.4-201ENST00000555149 351 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 SNORD95-201ENST00000579879 68 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC118658.2-201ENST00000618697 459 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC005840.5-201ENST00000619166 599 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 MTCO1P1-201ENST00000624263 1081 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AL049767.1-202ENST00000637826 242 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AP001273.1-201ENST00000624493 3152 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AL133268.1-201ENST00000405676 1401 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 DDX18P4-201ENST00000511690 1966 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 DHX9P1-201ENST00000436565 3076 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL034370.1-201ENST00000397254 1590 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 CASC19-221ENST00000641309 1382 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 MIR133B-201ENST00000362210 119 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 RNA5SP234-201ENST00000363916 119 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 RNU1-77P-201ENST00000390868 162 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL391422.1-201ENST00000402155 436 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL133325.1-201ENST00000421090 382 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 DSTNP5-201ENST00000427921 523 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 FAM96AP1-201ENST00000430879 482 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC004980.3-201ENST00000447046 365 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC007386.1-201ENST00000455212 582 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 RPL7P45-201ENST00000455851 743 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC108751.2-201ENST00000469993 231 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 NPM1P52-201ENST00000518264 846 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 SUGT1P3-202ENST00000604259 383 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 WBP1LP8-201ENST00000617401 327 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL596275.2-204ENST00000641628 552 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AL596275.2-206ENST00000641957 626 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 AC107027.3-201ENST00000565095 3473 ntBASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNB1IP1Q9NPC3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNB1IP1Q9NPC3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNB1IP1Q9NPC3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNB1IP1Q9NPC3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNB1IP1Q9NPC3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms