Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC027228.2-201ENST00000567141 2154 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 MIR133B-201ENST00000362210 119 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 GABARAPL3-201ENST00000412799 354 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 FGF7P3-201ENST00000454645 303 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC006967.1-201ENST00000467608 589 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC090142.2-201ENST00000483263 416 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 RN7SL441P-201ENST00000492388 296 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 YWHABP2-201ENST00000540201 713 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 DYNLL1P4-201ENST00000549314 266 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AL669942.2-201ENST00000620352 697 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC127024.6-201ENST00000621598 424 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 MIR8080-201ENST00000622224 89 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AC015660.5-201ENST00000623238 564 ntBASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HMG20AQ9NP66 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AL592182.3-201ENST00000642132 3304 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC011503.2-201ENST00000594230 1500 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RNA5SP234-201ENST00000363916 119 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 DSTNP5-201ENST00000427921 523 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC005033.1-201ENST00000428904 813 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC093414.1-201ENST00000434712 514 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 YWHAEP1-201ENST00000453697 763 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RANP1-206ENST00000455094 651 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RPS27AP2-201ENST00000457576 465 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RPS26P28-201ENST00000470806 348 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RPL23AP65-201ENST00000475608 468 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RPL7P40-201ENST00000481703 745 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 EIF1P7-201ENST00000487533 337 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC097173.1-201ENST00000505862 819 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RNA5SP154-201ENST00000516193 111 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 MTND6P33-201ENST00000571794 183 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 SLC25A36P1-201ENST00000590111 465 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC008521.2-201ENST00000591021 259 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC124856.1-201ENST00000600819 896 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC008814.1-201ENST00000603797 406 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 RNA5SP440-201ENST00000612665 119 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.48□□□□□ -1.69
HMG20AQ9NP66 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMG20AQ9NP66 ECM1P2-201ENST00000503354 1577 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms