Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPS29P9-201ENST00000440360 171 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 CYCSP24-201ENST00000445119 316 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC073264.2-201ENST00000448886 166 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 GAPDHP56-201ENST00000506031 988 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AL391358.1-201ENST00000605342 190 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AL133406.3-201ENST00000606817 541 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 BX005214.3-202ENST00000619809 325 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 MIR7641-1-201ENST00000627518 61 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC097063.1-201ENST00000426714 1797 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 RNU6-398P-201ENST00000384143 109 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 ATP5HP3-201ENST00000396994 486 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 SNORA77-201ENST00000408716 125 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 RNA5SP113-201ENST00000410486 84 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 RN7SKP100-201ENST00000411258 284 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC112498.1-201ENST00000444401 332 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC004980.3-201ENST00000447046 365 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC091042.1-201ENST00000579213 173 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 AC015914.2-201ENST00000618167 288 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 MAPK10-304ENST00000641341 3984 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 PCAT14-202ENST00000627127 3935 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 TET1P1-201ENST00000426627 2301 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC007738.1-201ENST00000413892 348 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC063943.1-201ENST00000465434 453 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 RN7SL244P-201ENST00000493405 297 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 MRPS33P2-201ENST00000507850 322 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC008147.3-201ENST00000548666 354 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 NDUFB4P11-201ENST00000560510 395 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AC116553.2-201ENST00000564203 463 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AP000648.2-201ENST00000624182 404 ntBASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.05□□□□□ -1.44
RPAP1Q9BWH6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AC000374.1-201ENST00000434698 1745 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AC079741.1-201ENST00000321498 212 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 EI24P3-201ENST00000399046 1062 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 HMGB3P7-201ENST00000400214 611 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 SNORA11-201ENST00000408789 128 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AC091390.1-201ENST00000433904 331 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AL136455.1-201ENST00000441083 1240 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms