Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC135999.1-201ENST00000478962 479 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC079080.1-201ENST00000479841 822 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 OR9N1P-201ENST00000491296 333 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 OR5H3P-201ENST00000502817 919 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC021146.8-201ENST00000507455 733 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC074087.1-201ENST00000512059 724 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 MTCO2P32-201ENST00000514865 403 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RNU6-1129P-201ENST00000515964 104 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL121594.2-201ENST00000541658 472 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC006115.2-201ENST00000596823 202 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AP003465.2-201ENST00000602571 373 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC073387.2-201ENST00000604797 784 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL133243.1-201ENST00000614487 366 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 MIR1264-201ENST00000616374 69 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL603755.1-201ENST00000619504 163 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC024595.1-201ENST00000623088 387 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL356266.1-201ENST00000623311 483 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL359715.5-201ENST00000623431 443 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 SNORA17.5-201ENST00000630429 132 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC099654.10-201ENST00000640395 161 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF542P-204ENST00000482727 1305 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 RN7SKP292-201ENST00000365522 317 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 RNA5SP122-201ENST00000384457 108 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 RAB9AP4-201ENST00000415230 609 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 IFNNP1-201ENST00000429219 553 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 TAF9P1-201ENST00000445421 515 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 RPL12P26-201ENST00000452430 487 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL358876.1-201ENST00000453364 1075 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 TAF9P2-201ENST00000454958 515 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AP002371.1-201ENST00000463604 433 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 SNRPCP3-201ENST00000474888 476 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC022215.1-201ENST00000481770 362 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 RPL38P3-201ENST00000484463 213 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC074255.1-201ENST00000511259 501 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 CYCSP22-201ENST00000517555 339 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC244502.2-201ENST00000543361 851 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 IGBP1P1-201ENST00000554337 1009 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL133241.1-201ENST00000556832 487 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC135628.1-201ENST00000568867 534 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 MIR3614-201ENST00000581261 86 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC078795.2-201ENST00000602835 1252 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AC009163.6-201ENST00000612367 342 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 AL158163.2-201ENST00000619110 700 ntBASIC6.09□□□□□ -1.43
CDK5RAP1Q96SZ6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms