Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ZNF812P-201ENST00000457674 1694 ntBASIC7.96□□□□□ -1.13
IFT140Q96RY7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 U3.32-201ENST00000408116 212 ntBASIC7.96□□□□□ -1.13
IFT140Q96RY7 RAB9AP4-201ENST00000415230 609 ntBASIC7.96□□□□□ -1.13
IFT140Q96RY7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 RPL19P16-201ENST00000433839 588 ntBASIC7.96□□□□□ -1.13
IFT140Q96RY7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 OR8R1P-201ENST00000543943 764 ntBASIC7.96□□□□□ -1.13
IFT140Q96RY7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
IFT140Q96RY7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 AL121932.1-201ENST00000605542 214 ntBASIC7.96□□□□□ -1.13
IFT140Q96RY7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC7.96□□□□□ -1.13
IFT140Q96RY7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
IFT140Q96RY7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.96□□□□□ -1.14
IFT140Q96RY7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
IFT140Q96RY7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
IFT140Q96RY7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
IFT140Q96RY7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
IFT140Q96RY7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.96□□□□□ -1.14
IFT140Q96RY7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 MAPK10-349ENST00000641767 3661 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 SNORA71.2-201ENST00000364941 134 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 RNU6-761P-201ENST00000384148 107 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 MIR670-201ENST00000390142 98 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 RNU1-82P-201ENST00000390851 165 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 AL035079.1-201ENST00000405210 287 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC046176.1-201ENST00000435260 1170 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 RPS3AP54-201ENST00000435535 734 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 UQCRHP4-201ENST00000471686 272 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
IFT140Q96RY7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
IFT140Q96RY7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 AL021877.2-201ENST00000624442 10684 ntBASIC7.95□□□□□ -1.14
IFT140Q96RY7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
IFT140Q96RY7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
IFT140Q96RY7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.95□□□□□ -1.14
IFT140Q96RY7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 AL132765.1-201ENST00000434165 553 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 RPL23AP93-201ENST00000440847 484 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 RRM2P4-201ENST00000441721 562 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 RPL21P126-201ENST00000470049 478 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 RN7SL652P-201ENST00000577769 300 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 U3.53-201ENST00000628922 216 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
IFT140Q96RY7 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
IFT140Q96RY7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 SNORA11.1-201ENST00000408133 129 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 RPL23AP26-201ENST00000412728 464 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 AC004980.3-201ENST00000447046 365 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 OR8A2P-201ENST00000528631 952 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
IFT140Q96RY7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.94□□□□□ -1.14
IFT140Q96RY7 AC005618.4-201ENST00000625053 554 ntBASIC7.94□□□□□ -1.14
IFT140Q96RY7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 AL117378.2-201ENST00000622916 1337 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 RNA5SP366-201ENST00000365454 123 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 SNORA48.4-201ENST00000391089 134 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 VN1R34P-201ENST00000447387 883 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 RN7SL98P-201ENST00000462271 300 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 SNORA31.9-201ENST00000516429 84 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 AP005019.3-201ENST00000620418 560 ntBASIC7.93□□□□□ -1.14
IFT140Q96RY7 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
IFT140Q96RY7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
IFT140Q96RY7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC133552.1-201ENST00000569988 4007 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms