Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNA5SP230-201ENST00000517039 122 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC138832.1-201ENST00000522871 556 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AP001922.4-201ENST00000526967 290 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 GCSHP4-201ENST00000538792 439 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC125612.1-201ENST00000547580 377 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 MIR4660-201ENST00000583549 74 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC015849.6-201ENST00000605454 474 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AP001521.2-201ENST00000608772 546 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 OR9K1P-202ENST00000641111 3217 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 HCFC2P1-201ENST00000392864 1592 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC013442.1-201ENST00000397347 228 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AL133270.1-201ENST00000402635 279 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC093414.1-201ENST00000434712 514 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 PA2G4P6-201ENST00000438325 1197 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 RPL31P44-201ENST00000447680 377 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 RPL7P16-201ENST00000479738 738 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 GAPDHP56-201ENST00000506031 988 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 BTF3P13-201ENST00000513224 490 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 RNA5SP392-201ENST00000516905 112 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC006349.1-201ENST00000555526 235 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AP002884.5-201ENST00000595053 1132 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC104687.2-201ENST00000604442 342 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AL445528.2-201ENST00000620582 470 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC087821.1-201ENST00000623639 567 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 CR382285.2-201ENST00000624662 1495 ntBASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.99□□□□□ -1.61
ECHDC3Q96DC8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AL450345.1-202ENST00000605741 3881 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 HMGB3P7-201ENST00000400214 611 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AL358178.1-201ENST00000407698 397 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 GTF2IP5-201ENST00000414608 731 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 COX6B1P1-201ENST00000415962 213 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 HMGN2P27-201ENST00000427352 270 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 RPS27P18-201ENST00000431701 247 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 CYCSP24-201ENST00000445119 316 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 SUMO2P1-206ENST00000445436 284 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 snoU13.20-201ENST00000459180 104 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AC090142.2-201ENST00000483263 416 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AC073073.1-201ENST00000493920 463 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 RN7SL591P-201ENST00000496150 292 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 RFPL4AP5-201ENST00000514977 504 ntBASIC4.98□□□□□ -1.61
ECHDC3Q96DC8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms