Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 RBM22P12-201ENST00000567098 1255 ntBASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 AC006927.2-201ENST00000639256 389 ntBASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 AC087565.3-203ENST00000641018 837 ntBASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 LINC01963-201ENST00000562038 3148 ntBASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CSNK2A3Q8NEV1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL022322.2-201ENST00000624072 20397 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 HSPA8P14-201ENST00000552265 1805 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC004158.1-201ENST00000564508 4319 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 RNA5SP187-201ENST00000384400 119 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 MIR142-201ENST00000384835 87 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 RPS27AP11-201ENST00000402798 447 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 UBE2V1P11-201ENST00000411559 285 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC245060.4-201ENST00000413293 1121 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LINC01347-201ENST00000417964 355 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 MTCO2P23-201ENST00000425216 680 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 BX323845.3-201ENST00000428215 527 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 FO393419.3-201ENST00000428741 282 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC114973.1-201ENST00000429057 632 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 FABP5P3-201ENST00000437960 408 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL596266.1-201ENST00000448132 400 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC011476.1-201ENST00000466725 307 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 RN7SL741P-201ENST00000482473 289 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC008427.1-201ENST00000503102 655 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 UBE2V1P12-201ENST00000503954 474 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 RNU6-1004P-201ENST00000516584 111 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC118942.1-201ENST00000529674 1035 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AP003717.3-201ENST00000544832 1180 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL109741.3-201ENST00000561748 592 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL049838.1-201ENST00000563647 981 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 MTND1P8-201ENST00000571424 950 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 RN7SL622P-201ENST00000585292 275 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC099785.1-201ENST00000605697 437 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AL139124.1-201ENST00000609123 421 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AC129915.3-201ENST00000634128 948 ntBASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSNK2A3Q8NEV1 PWAR1-201ENST00000624188 2414 ntBASIC4.84□□□□□ -1.64
CSNK2A3Q8NEV1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.84□□□□□ -1.64
CSNK2A3Q8NEV1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CSNK2A3Q8NEV1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CSNK2A3Q8NEV1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 AL603750.1-201ENST00000624216 1717 ntBASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 AC106872.5-201ENST00000508856 1416 ntBASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.83□□□□□ -1.64
CSNK2A3Q8NEV1 HSPA8P17-201ENST00000427029 1382 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms