Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL376P-201ENST00000578594 264 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC018638.8-201ENST00000588755 281 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC022432.1-201ENST00000595739 310 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 VN1R80P-201ENST00000597126 338 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC009027.1-201ENST00000604510 479 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC055876.5-201ENST00000605667 259 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 MIR98-201ENST00000606724 119 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC103974.2-201ENST00000611319 778 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AL158801.5-201ENST00000623123 465 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC019278.1-201ENST00000623516 479 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 ERCC6-202ENST00000374127 1782 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC096921.2-201ENST00000561507 1916 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC004014.2-201ENST00000623718 5122 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC007993.1-201ENST00000621298 2430 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 TCP11X1-202ENST00000622971 1372 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL138847.1-201ENST00000258651 546 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 RNA5SP301-201ENST00000362537 121 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-451P-201ENST00000362921 107 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 IGLC6-201ENST00000410078 317 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 RN7SKP119-201ENST00000410753 273 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 YWHAZP3-201ENST00000415292 738 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC005534.2-201ENST00000431047 433 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 GTF2IP20-201ENST00000431663 360 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL645937.3-201ENST00000453647 936 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 HMGB1P4-201ENST00000455362 567 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC021074.2-201ENST00000468434 172 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC010301.1-201ENST00000473936 355 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 SUMO2P4-201ENST00000504193 276 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC107385.1-201ENST00000507985 778 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC109811.2-201ENST00000509609 452 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 MTND6P2-201ENST00000512226 524 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NTAN1P2-201ENST00000515730 940 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 Vault.3-201ENST00000516676 95 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 IGLVIV-64-201ENST00000518581 301 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 COX6CP8-201ENST00000522620 226 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AP001994.1-201ENST00000527539 826 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC015917.1-201ENST00000579654 510 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC008687.2-201ENST00000597865 520 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms