Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 MTHFD2P5-201ENST00000320415 844 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 RN7SKP186-201ENST00000365371 303 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 MIR130A-201ENST00000385274 89 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR7E101P-201ENST00000400428 513 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 ST13P16-201ENST00000401760 781 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 MIR1282-201ENST00000408865 101 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 MTND4LP21-201ENST00000415303 295 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ARAFP1-201ENST00000422172 605 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 DEFB130D-201ENST00000426866 237 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 PCNPP2-201ENST00000441651 455 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 RPS10P18-201ENST00000442662 495 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 RPL6P5-201ENST00000445678 828 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC073072.2-201ENST00000447425 348 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR7E116P-201ENST00000448529 957 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 RPL12P26-201ENST00000452430 487 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 RPS23P6-201ENST00000466136 431 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC073610.1-201ENST00000489971 396 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ST13P12-201ENST00000508958 1094 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC021678.3-201ENST00000517893 476 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 IGKV2-19-201ENST00000518132 283 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 MTCYBP41-201ENST00000528913 1123 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AP004609.2-201ENST00000532177 190 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AP000619.2-201ENST00000546014 969 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 DPPA2P4-201ENST00000563717 878 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC090286.3-201ENST00000573133 187 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR7A8P-201ENST00000595427 913 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AP001267.4-201ENST00000602598 545 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC100767.2-201ENST00000604840 693 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR51C1P-201ENST00000608504 942 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC013468.1-201ENST00000608680 598 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AL158163.2-201ENST00000619110 700 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 AL157770.1-201ENST00000623049 439 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 GTF2IP4-201ENST00000453092 2054 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VRK3Q8IV63 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 YES1P1-201ENST00000418510 1628 ntBASIC5.63□□□□□ -1.51
VRK3Q8IV63 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.63□□□□□ -1.51
VRK3Q8IV63 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AP001157.1-201ENST00000550837 2339 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 OR56A4-201ENST00000330728 1209 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 UBE2V1P10-201ENST00000414685 269 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms