Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 KNOP1P3-201ENST00000446933 426 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 AC009963.4-201ENST00000448535 339 ntBASIC4.32□□□□□ -1.72
LMO4P61968 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.32□□□□□ -1.72
LMO4P61968 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 MTATP6P14-201ENST00000455189 673 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 RNU6-599P-201ENST00000459383 107 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RNU6-1193P-201ENST00000459461 107 ntBASIC4.32□□□□□ -1.72
LMO4P61968 STRADBP1-201ENST00000478954 1281 ntBASIC4.32□□□□□ -1.72
LMO4P61968 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 GTF2IP9-201ENST00000502460 301 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC006427.1-201ENST00000514359 712 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC022360.1-201ENST00000521058 340 ntBASIC4.32□□□□□ -1.72
LMO4P61968 OR4V1P-201ENST00000525394 1140 ntBASIC4.32□□□□□ -1.72
LMO4P61968 OR10D4P-201ENST00000525892 951 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AC106785.3-201ENST00000564064 847 ntBASIC4.32□□□□□ -1.72
LMO4P61968 CD24P2-201ENST00000565486 219 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.32□□□□□ -1.72
LMO4P61968 ZNF92P2-201ENST00000600543 1059 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AL671309.1-201ENST00000603750 544 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC008814.1-201ENST00000603797 406 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC097065.2-201ENST00000608159 533 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AF129408.1-201ENST00000608767 431 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC009032.1-201ENST00000617574 431 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RNU6-368P-201ENST00000620928 107 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RNU6-538P-201ENST00000622329 107 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC010608.3-201ENST00000625048 527 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AL353662.3-201ENST00000625131 237 ntBASIC4.32□□□□□ -1.72
LMO4P61968 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 AC107021.2-201ENST00000567714 2095 ntBASIC4.31□□□□□ -1.72
LMO4P61968 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 INTS6P1-201ENST00000504674 2530 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC007159.1-201ENST00000566529 4706 ntBASIC4.31□□□□□ -1.72
LMO4P61968 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 SNORA51.8-201ENST00000384234 132 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 AL139128.1-201ENST00000413921 941 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 AC017019.1-201ENST00000426129 261 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 AC011242.1-201ENST00000433596 1158 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL359265.1-201ENST00000440296 795 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 AC091685.2-201ENST00000454924 864 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 AL139824.2-201ENST00000458731 1095 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC104629.2-201ENST00000468627 598 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AP000797.2-201ENST00000475768 606 ntBASIC4.31□□□□□ -1.72
LMO4P61968 HMGN2P25-201ENST00000486956 268 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC022133.1-201ENST00000490961 571 ntBASIC4.31□□□□□ -1.72
LMO4P61968 IGBP1P4-201ENST00000503202 879 ntBASIC4.31□□□□□ -1.72
LMO4P61968 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 AC111000.6-201ENST00000514471 709 ntBASIC4.31□□□□□ -1.72
LMO4P61968 HMGN1P9-201ENST00000515212 298 ntBASIC4.31□□□□□ -1.72
LMO4P61968 CDH12P4-201ENST00000517835 295 ntBASIC4.31□□□□□ -1.72
LMO4P61968 CDH12P3-201ENST00000517935 295 ntBASIC4.31□□□□□ -1.72
LMO4P61968 CDH12P1-201ENST00000518435 295 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 AC104997.1-201ENST00000519761 717 ntBASIC4.31□□□□□ -1.72
LMO4P61968 OR8Q1P-201ENST00000526467 655 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms