Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC092745.2-202ENST00000411880 369 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 LINC01881-201ENST00000416103 412 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 MTCO1P21-201ENST00000416634 589 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 RPL7AP51-201ENST00000422016 760 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC009784.1-201ENST00000426484 460 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.45□□□□□ -1.54
CLRN1P58418 CDY14P-201ENST00000431260 1014 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 CDY23P-201ENST00000451661 1014 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC124945.1-201ENST00000485133 188 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 RPL12P30-201ENST00000488389 499 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AP002453.1-201ENST00000492327 668 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 CYP4F27P-201ENST00000514557 494 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 TPM3P3-201ENST00000521343 354 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.45□□□□□ -1.54
CLRN1P58418 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 UBE2NP1-201ENST00000545592 458 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC006530.1-201ENST00000555980 571 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC027807.1-201ENST00000559921 996 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 ISCA1P3-201ENST00000577104 373 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 MIR5010-201ENST00000582846 120 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 VN1R82P-201ENST00000601481 356 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 RN7SL261P-201ENST00000613441 282 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC009120.7-201ENST00000623452 780 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 AC011416.1-201ENST00000514947 1732 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 AC011504.1-201ENST00000623331 4103 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 AC239868.2-201ENST00000564237 4527 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLRN1P58418 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLRN1P58418 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.44□□□□□ -1.54
CLRN1P58418 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 OR1L1-202ENST00000373686 1083 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL451142.1-201ENST00000375867 775 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 RNU6-1200P-201ENST00000384162 107 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 MIR188-201ENST00000385034 86 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLRN1P58418 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL121835.1-201ENST00000404250 354 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL445213.1-201ENST00000412589 747 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 NME1P1-201ENST00000420914 382 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.44□□□□□ -1.54
CLRN1P58418 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.44□□□□□ -1.54
CLRN1P58418 RPL7P29-201ENST00000437151 728 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.44□□□□□ -1.54
CLRN1P58418 AC007383.1-201ENST00000445875 636 ntBASIC5.44□□□□□ -1.54
CLRN1P58418 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms